USAP-DC

{"dp_type": "Project", "free_text": "Population Genetics"}

[{"awards": "0636696 DeVries, Arthur; 2026045 Schofield, Oscar; 1440435 Ducklow, Hugh; 1543383 Postlethwait, John; 1344502 Ducklow, Hugh; 2224611 Schofield, Oscar; 1142158 Cheng, Chi-Hing", "bounds_geometry": "POLYGON((-180 -60,-144 -60,-108 -60,-72 -60,-36 -60,0 -60,36 -60,72 -60,108 -60,144 -60,180 -60,180 -63,180 -66,180 -69,180 -72,180 -75,180 -78,180 -81,180 -84,180 -87,180 -90,144 -90,108 -90,72 -90,36 -90,0 -90,-36 -90,-72 -90,-108 -90,-144 -90,-180 -90,-180 -87,-180 -84,-180 -81,-180 -78,-180 -75,-180 -72,-180 -69,-180 -66,-180 -63,-180 -60))", "dataset_titles": "Environmental Data Initiative Repository, Supporting LTER; Meristic, genetic, and fecundity data associated with the species description of Akarotaxis gouldae", "datasets": [{"dataset_uid": "000246", "doi": "", "keywords": null, "people": null, "repository": "EDI", "science_program": null, "title": "Environmental Data Initiative Repository, Supporting LTER", "url": "https://portal.edirepository.org/nis/browseServlet?searchValue=PAL"}, {"dataset_uid": "602016", "doi": "10.15784/602016", "keywords": "Antarctica; Cryonotothenioid; Cryosphere; Population Genetics; Southern Ocean", "people": "Biesack, Ellen; Steinberg, Deborah; Hilton, Eric; Cheng, Chi-Hing; McDowell, Jan; Desvignes, Thomas; Corso, Andrew", "repository": "USAP-DC", "science_program": null, "title": "Meristic, genetic, and fecundity data associated with the species description of Akarotaxis gouldae", "url": "https://www.usap-dc.org/view/dataset/602016"}], "date_created": "Tue, 11 Mar 2025 00:00:00 GMT", "description": "Since 1990, Palmer LTER (PAL) research has been guided by the hypothesis that variability in the polar marine ecosystem is mechanistically coupled to changes in the annual advance, retreat and spatial extent of sea ice. Since that time, the hypothesis has been modified to incorporate climate migration, i.e. the displacement of a cold, dry polar climate by a warm, moist climate regime in the northern component of the PAL region, producing fundamental changes in food web structure and elemental cycling. The observed northern changes are affecting all trophic levels and elemental cycling, and the primary mechanism of change involves match-mismatch dynamics. The proposed research builds on previous findings, with a new emphasis on process studies and modeling to elucidate the mechanistic links between teleconnections, climate change, physical oceanographic forcing and ecosystem dynamics. The proposed research will examine the hypothesis that regional warming and sea ice decline associated with historical and on-going climate migration in the northern part of the study area have altered key phenological relationships, leading to changes in species distributions, increasing trophic mismatches and changes in habitat, food availability, ecosystem dynamics and biogeochemical cycling. Through targeted process studies linked to numerical model simulations, the research also will test the hypothesis that deep cross-shelf canyons characterizing the core study region are focal areas for ecosystem processes that result in predictable, elevated food resources for top-predators. The effort includes the addition of 3 new PIs: a zooplankton ecologist with expertise in biogeochemical fluxes, a phytoplankton ecologist focusing on bio-optics and autonomous observations using gliders, and a numerical simulation modeler specializing in coupled global models of ocean circulation, plankton ecology and biogeochemical cycles. The program will add trace metal sampling and analysis, moored physical oceanographic sensors, a moored sediment trap in the south, drifting sediment traps and stable carbon (del 13C) and nitrogen (del 15N) isotope analyses. Missions lasting up to 45 days using gliders deployed before, during and after summer cruises will, along with moorings and satellite remote sensing of sea ice, ocean color, sea surface temperatures and wind fields, greatly extend the observational program in space and time. Since its inception, PAL has been a leader in Information Management to enable knowledge-building within and beyond the Antarctic, oceanographic and LTER communities. PAL has designed and deployed a new information infrastructure with a relational database architecture to facilitate data distribution and sharing. The Education and Outreach program capitalizes on the public\u0027s fascination with Antarctica to promote scientific literacy from kindergarten students to adult citizens concerned with climate change and environmental sustainability. Through communicating results to the public and working with scientific assessment bodies (e.g., IPCC) and Antarctic Treaty parties to protect Earth\u0027s last frontier, PAL researchers contribute to the national scientific agenda and the greater public benefit.", "east": 180.0, "geometry": "POINT(0 -89.999)", "instruments": null, "is_usap_dc": true, "keywords": "Antarctica; Cryonotothenioid; R/V LMG; Bellingshausen Sea; Southern Ocean; Notothenioid; FISHERIES", "locations": "Bellingshausen Sea; Southern Ocean; Antarctica", "north": -60.0, "nsf_funding_programs": "Antarctic Organisms and Ecosystems; Antarctic Organisms and Ecosystems; Antarctic Integrated System Science; Antarctic Organisms and Ecosystems; Antarctic Integrated System Science; Antarctic Organisms and Ecosystems; Antarctic Integrated System Science; Antarctic Organisms and Ecosystems", "paleo_time": null, "persons": "Corso, Andrew; Desvignes, Thomas; McDowell, Jan; Cheng, Chi-Hing; Biesack, Ellen; Steinberg, Deborah; Hilton, Eric", "platforms": "WATER-BASED PLATFORMS \u003e VESSELS \u003e SURFACE \u003e R/V LMG", "repo": "EDI", "repositories": "EDI; USAP-DC", "science_programs": "LTER", "south": -90.0, "title": "LTER Palmer, Antarctica (PAL): Land-Shelf-Ocean Connectivity, Ecosystem Resilience and Transformation in a Sea-Ice Influenced Pelagic Ecosystem - continuing", "uid": "p0010494", "west": -180.0}, {"awards": "2146068 Kienle, Sarah", "bounds_geometry": null, "dataset_titles": "Data from: Individual specialization in a generalist apex predator: The leopard seal; ddRADseq leopard seal (SRR32669466); Genome assembly ASM5032014v1; Hydrurga leptonyx isolate:HLNZ013 (leopard seal); Leopard seals DDRAD", "datasets": [{"dataset_uid": "200550", "doi": "10.3389/fgene.2025.1561273", "keywords": null, "people": null, "repository": "NCBI Genbank", "science_program": null, "title": "Genome assembly ASM5032014v1", "url": "https://www.ncbi.nlm.nih.gov/datasets/genome/GCA_050320145.1/"}, {"dataset_uid": "200552", "doi": "10.1038/s41598-025-25641-w", "keywords": null, "people": null, "repository": "SRA (NCBI)", "science_program": null, "title": "ddRADseq leopard seal (SRR32669466)", "url": "https://trace.ncbi.nlm.nih.gov/Traces/study/?acc=SRP569941\u0026o=acc_s%3Aa"}, {"dataset_uid": "200549", "doi": "10.5061/dryad.f4qrfj75k", "keywords": null, "people": null, "repository": "Dryad", "science_program": null, "title": "Data from: Individual specialization in a generalist apex predator: The leopard seal", "url": "https://datadryad.org/dataset/doi:10.5061/dryad.f4qrfj75k"}, {"dataset_uid": "200548", "doi": "", "keywords": null, "people": null, "repository": "Github", "science_program": null, "title": "Leopard seals DDRAD", "url": "https://github.com/DavidVendrami/LeopardSeals_ddRAD"}, {"dataset_uid": "200551", "doi": "10.3389/fgene.2025.1561273", "keywords": null, "people": null, "repository": "NCBI (BioProject)", "science_program": null, "title": "Hydrurga leptonyx isolate:HLNZ013 (leopard seal)", "url": "https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1194539/"}], "date_created": "Mon, 12 Sep 2022 00:00:00 GMT", "description": "The leopard seal (Hydrurga leptonyx) is an enigmatic apex predator in the rapidly changing Southern Ocean. As top predators, leopard seals play a disproportionately large role in ecosystem functioning and act as sentinel species that can track habitat changes. How leopard seals respond to a warming environment depends on their adaptive capacity, that is a species\u2019 ability to cope with environmental change. However, leopard seals are one of the least studied apex predators on Earth, hindering our ability to predict how the species is responding to polar environmental changes. Investigating the adaptability of Antarctic biota in a changing system aligns with NSF\u2019s Strategic Vision for Investments in Antarctic and Southern Ocean Research. This research, which is tightly integrated with educational and outreach activities, will increase diversity in STEM and Antarctic science by recruiting students from historically underrepresented groups in STEM and providing training, mentoring, and educational opportunities at an emerging Hispanic Serving Institution and a Historically Black Colleges and Universities campus. This project will improve STEM education and science literacy via museum collaborations, creation of informational videos and original artwork depicting the research. The proposal supports data and sample reuse in polar research and long-term reuse of scientific data, thereby maximizing NSF\u2019s investment in previous field research and reducing operational costs. The researchers will investigate leopard seals adaptive capacity to the warming Southern Ocean by quantifying their ability to move (dispersal ability), adapt (genetic diversity), and change (plasticity). Aim 1 of the research will determine leopard seals\u2019 dispersal ability by assessing their distribution and movement patterns. Aim 2 will quantify genetic diversity by analyzing genetic variability and population structure and Aim 3 will examine phenotypic plasticity by evaluating changes in their ecological niche and physiological responses. The international, multidisciplinary team will analyze existing data (e.g., photographs, census data, life history data, tissue samples, body morphometrics) collected from leopard seals across the Southern Ocean over the last decade. Additionally, land- and ship-based field efforts will generate comparable data from unsampled regions in the Southern Ocean. The research project will analyze these historical and contemporary datasets to evaluate the adaptive capacity of leopard seals against the rapidly warming Southern Ocean. This research is significant because changes in the distribution, genetic diversity, and ecophysiology of leopard seals can dramatically restructure polar and subpolar communities. Further, the research will expand understanding of leopard seals\u2019 ecological role, likely characterizing the species as flexible polar and subpolar predators throughout the Southern Hemisphere. The findings of this research will be relevant for use in ecosystem-based management decisions\u2014including the design of Marine Protected Areas\u2014 across three continents. This study will highlight intrinsic traits that determine species\u2019 adaptive capacity, as well as showcase the dynamic links between polar and subpolar ecosystems. This award reflects NSF\u0027s statutory mission and has been deemed worthy of support through evaluation using the Foundation\u0027s intellectual merit and broader impacts review criteria.", "east": null, "geometry": null, "instruments": null, "is_usap_dc": true, "keywords": "Foraging Ecology; Sub-Antarctic; Ecophysiology; Population Genetics; FIELD SURVEYS; SPECIES/POPULATION INTERACTIONS; Livingston Island; Adaptation; Leopard Seal; MARINE ECOSYSTEMS; Movement Data; MAMMALS; ; Antarctica; Chile; Southern Ocean", "locations": "Southern Ocean; Chile; ; Antarctica; Sub-Antarctic; Livingston Island", "north": null, "nsf_funding_programs": "Antarctic Organisms and Ecosystems", "paleo_time": null, "persons": "Kienle, Sarah; Bonin, Carolina; Borras-Chavez, Renato", "platforms": "LAND-BASED PLATFORMS \u003e FIELD SITES \u003e FIELD SURVEYS", "repo": "NCBI Genbank", "repositories": "Dryad; Github; NCBI (BioProject); NCBI Genbank; SRA (NCBI)", "science_programs": null, "south": null, "title": "Move, Adapt, or Change: Examining the Adaptive Capacity of a Southern Ocean Apex Predator, the Leopard Seal", "uid": "p0010375", "west": null}, {"awards": "2037598 Alberto, Filipe; 2037670 Heine, John", "bounds_geometry": "POLYGON((162 -76,162.8 -76,163.6 -76,164.4 -76,165.2 -76,166 -76,166.8 -76,167.6 -76,168.4 -76,169.2 -76,170 -76,170 -76.3,170 -76.6,170 -76.9,170 -77.2,170 -77.5,170 -77.8,170 -78.1,170 -78.4,170 -78.7,170 -79,169.2 -79,168.4 -79,167.6 -79,166.8 -79,166 -79,165.2 -79,164.4 -79,163.6 -79,162.8 -79,162 -79,162 -78.7,162 -78.4,162 -78.1,162 -77.8,162 -77.5,162 -77.2,162 -76.9,162 -76.6,162 -76.3,162 -76))", "dataset_titles": null, "datasets": null, "date_created": "Mon, 23 May 2022 00:00:00 GMT", "description": "Climate change is changing the number of sea-ice free days in coastal polar environments, which is impacting Antarctic communities. This study will evaluate the change in macroalgae (seaweed) communities to increased light availability in order to predict if macroalgae will be able to spread to newly ice-free locations faster than invertebrates (e.g., sponges, bryozoans, tunicates, and polychaetes) in shallow underwater rocky habitats. Study sites will include multiple locations in McMurdo Sound, Ross Sea, Antarctica. This study will establish patterns in plant properties, genetic diversity and reproductive characteristics of two species of seaweeds, Phyllophora antarctica and Iridaea cordata in relation to depth and light. Long-term changes will be assesed by comparing to results from a survey in 1980. This will be the first study in the region to estimate the potential effects of climate, in particular reductions in annual sea ice cover and resulting increase in light intensity and duration, on shifts in macroalgal communities in McMurdo Sound. Three-dimensional photogrammetry will also be used to evaluate benthic community structure on the newly discovered offshore Dellbridge Seamount. Visualization from the video footage will be shared with web-based interactive applications to engage and educate the public in polar ecology and factors causing changes in marine community ecosystem structure in this important region. This project is evaluating macroalgae biogeography in Antarctic coastal waters near McMurdo Sound, a relatively understudied region that is experiencing large changes in fast sea ice coverage. The population ecology and genetic diversity of nearshore shallow and deeper offshore benthic macroalgal communities of Phyllophora antarctica and Iridaea cordata will be assessed for percentage cover, biomass, blade length, and reproductive characteristics at seven locations: Cape Royds, Cape Evans, Little Razorback Islands, Turtle Rock, Arrival Heights, Granite Harbor, and Dellbridge Seamount in McMurdo Sound, Antarctica. The team is also assessing differential reproductive successes at different depths and comparing results to populations surveyed in 1980. The genetic diversity of the two species is being estimated using a combination of whole genome sequencing and species-specific microsatellite genetic markers. Samples from this study will be compared to samples collected from other regions in Antarctica such as the South Shetland Islands and Antarctic Peninsula. In addition, a macroalgal assemblage and 3D models of the community structure will be generated using photogrammetry from the newly discovered Dellbridge Seamount that is located 2 km offshore in McMurdo Sound. With the addition of photogrammetry and 3D visualization to this research, web-based applications will be used to engage and educate the public in subtidal polar ecology, population genetics, and the importance of Antarctic science to their lives. This award reflects NSF\u0027s statutory mission and has been deemed worthy of support through evaluation using the Foundation\u0027s intellectual merit and broader impacts review criteria.", "east": 170.0, "geometry": "POINT(166 -77.5)", "instruments": null, "is_usap_dc": true, "keywords": "AMD; McMurdo Sound; USAP-DC; Amd/Us; COMMUNITY DYNAMICS; FIELD INVESTIGATION; MACROALGAE (SEAWEEDS); USA/NSF", "locations": "McMurdo Sound", "north": -76.0, "nsf_funding_programs": "Antarctic Organisms and Ecosystems; Antarctic Organisms and Ecosystems", "paleo_time": null, "persons": "Heine, John; Goldberg, Nisse; Alberto, Filipe", "platforms": "LAND-BASED PLATFORMS \u003e FIELD SITES \u003e FIELD INVESTIGATION", "repositories": null, "science_programs": null, "south": -79.0, "title": "Collaborative Research: Biogeography, Population Genetics, and Ecology of two Common Species of Fleshy Red Algae in McMurdo Sound", "uid": "p0010322", "west": 162.0}, {"awards": "1947040 Postlethwait, John", "bounds_geometry": "POLYGON((-65.3 -63.3,-65 -63.3,-64.7 -63.3,-64.4 -63.3,-64.1 -63.3,-63.8 -63.3,-63.5 -63.3,-63.2 -63.3,-62.9 -63.3,-62.6 -63.3,-62.3 -63.3,-62.3 -63.47,-62.3 -63.64,-62.3 -63.81,-62.3 -63.98,-62.3 -64.15,-62.3 -64.32,-62.3 -64.49,-62.3 -64.66,-62.3 -64.83,-62.3 -65,-62.6 -65,-62.9 -65,-63.2 -65,-63.5 -65,-63.8 -65,-64.1 -65,-64.4 -65,-64.7 -65,-65 -65,-65.3 -65,-65.3 -64.83,-65.3 -64.66,-65.3 -64.49,-65.3 -64.32,-65.3 -64.15,-65.3 -63.98,-65.3 -63.81,-65.3 -63.64,-65.3 -63.47,-65.3 -63.3))", "dataset_titles": "18 SSU rDNA type sequences for Notoxcellia coronata (nov. sp.); 18 SSU rDNA type sequences for Notoxcellia picta (nov. sp.); Expedition Data of LMG1805; Fish pictures and skin pathology of X-cell infection in Trematomus scotti.; Gonad and skin histology of Trematomus loennbergii infected by Notoxcellia sp.; Histopathology of X-cell xenomas in Trematomus scotti and Nototheniops larseni.; In situ hybridization of X-cell and host fish 18S SSU rRNA in alternate sections of tumor xenomas.; Metagenomic analysis of apparently healthy and tumor samples using Kaiju software ; microMRI analyses of Trematomus scotti Tsco_18_08 with X-cell xenomas; Morphological and pathological data of Trematomus scotti specimens captured on May 30th, 2018 in Andvord Bay.; Morphological, fecundity, and age data of Trematomus scotti from Andvord Bay and the Weddell Sea.; Nomenclatural Act for the genus Notoxcellia; Nomenclatural Act for the species Notoxcellia coronata; Nomenclatural Act for the species Notoxcellia picta; Phylogenetic Analysis of Notoxcellia species.; Phylogenetic Analysis of Notoxcellia species, including novel Ross Sea specimen; Raw Illumina sequencing reads from skin tumors and visually healthy skins from Trematomus scotti and Nototheniops larseni; Similarity matrices of Notoxcellia spp.; Temperature profiles at five fishing locations on the West Antarctic Peninsula during austral fall 2018.; Trematomus scotti mt-co1 sequence alignment.; Trematomus scotti with X-cell xenomas", "datasets": [{"dataset_uid": "601495", "doi": "10.15784/601495", "keywords": "Antarctica; Antarctic Peninsula", "people": "Desvignes, Thomas", "repository": "USAP-DC", "science_program": null, "title": "Temperature profiles at five fishing locations on the West Antarctic Peninsula during austral fall 2018.", "url": "https://www.usap-dc.org/view/dataset/601495"}, {"dataset_uid": "601501", "doi": "10.15784/601501", "keywords": "Alveolata; Antarctica; Antarctic Peninsula; Biota; Notoxcellia Coronata; Notoxcellia Picta; Oceans; Perkinsozoa; Xcellidae", "people": "Desvignes, Thomas; Varsani, Arvind; Postlethwait, John", "repository": "USAP-DC", "science_program": null, "title": "Phylogenetic Analysis of Notoxcellia species.", "url": "https://www.usap-dc.org/view/dataset/601501"}, {"dataset_uid": "601494", "doi": "10.15784/601494", "keywords": "Andvord Bay; Antarctica; Fish", "people": "Postlethwait, John; Desvignes, Thomas; Lauridsen, Henrik; Le Francois, Nathalie", "repository": "USAP-DC", "science_program": null, "title": "Morphological and pathological data of Trematomus scotti specimens captured on May 30th, 2018 in Andvord Bay.", "url": "https://www.usap-dc.org/view/dataset/601494"}, {"dataset_uid": "200383", "doi": "", "keywords": null, "people": null, "repository": "ZooBank", "science_program": null, "title": "Nomenclatural Act for the species Notoxcellia coronata", "url": "https://zoobank.org/NomenclaturalActs/194d91b2-e268-4238-89e2-385819f2c35b"}, {"dataset_uid": "200384", "doi": "", "keywords": null, "people": null, "repository": "ZooBank", "science_program": null, "title": "Nomenclatural Act for the species Notoxcellia picta", "url": "https://zoobank.org/NomenclaturalActs/31062dd2-7202-47fa-86e0-7be5c55ac0e2"}, {"dataset_uid": "601892", "doi": "10.15784/601892", "keywords": "Antarctica; Biota; CO1; COX1; Cryonotothenioid; Cryosphere; Genetic Sequences; LMG1805; MT-CO1; Nototheniidae; Notothenioid; Population Genetics", "people": "Postlethwait, John; Papetti, Chiara; Schiavon, Luca ; Desvignes, Thomas", "repository": "USAP-DC", "science_program": null, "title": "Trematomus scotti mt-co1 sequence alignment.", "url": "https://www.usap-dc.org/view/dataset/601892"}, {"dataset_uid": "601893", "doi": "10.15784/601893", "keywords": "Age; Antarctica; Biota; Cryonotothenioid; Cryosphere; Fecundity; Growth; Length; Nototheniidae; Oceans; Otolith; Reproduction; Weight", "people": "La Mesa, Mario; Desvignes, Thomas; Valdivieso, Alejandro; Sguotti, Camilla; Cal\u00ec, Federico; Riginella, Emilio; Streeter, Margaret; Grondin, Jacob; Le Francois, Nathalie; Lucassen, Magnus; Mark, Felix C; Detrich, H. William; Papetti, Chiara; Postlethwait, John", "repository": "USAP-DC", "science_program": null, "title": "Morphological, fecundity, and age data of Trematomus scotti from Andvord Bay and the Weddell Sea.", "url": "https://www.usap-dc.org/view/dataset/601893"}, {"dataset_uid": "200443", "doi": null, "keywords": null, "people": null, "repository": "R2R", "science_program": null, "title": "Expedition Data of LMG1805", "url": "https://doi.org/10.7284/907930"}, {"dataset_uid": "200382", "doi": "", "keywords": null, "people": null, "repository": "ZooBank", "science_program": null, "title": "Nomenclatural Act for the genus Notoxcellia", "url": "https://zoobank.org/NomenclaturalActs/5cf9609e-0111-4386-8518-bd50b5bdde0e"}, {"dataset_uid": "200254", "doi": null, "keywords": null, "people": null, "repository": "R2R", "science_program": null, "title": "Expedition Data of LMG1805", "url": "https://www.rvdata.us/search/cruise/LMG1805"}, {"dataset_uid": "601496", "doi": "10.15784/601496", "keywords": "Andvord Bay; Antarctica; Fish", "people": "Postlethwait, John; Desvignes, Thomas; Lauridsen, Henrik", "repository": "USAP-DC", "science_program": null, "title": "Fish pictures and skin pathology of X-cell infection in Trematomus scotti.", "url": "https://www.usap-dc.org/view/dataset/601496"}, {"dataset_uid": "601536", "doi": "10.15784/601536", "keywords": "Alveolata; Antarctica; Antarctic Peninsula; Notoxcellia Coronata; Notoxcellia Picta; Perkinsozoa; Xcellidae", "people": "Desvignes, Thomas; Kent, Michael L. ; Murray, Katrina N. ; Postlethwait, John", "repository": "USAP-DC", "science_program": null, "title": "Histopathology of X-cell xenomas in Trematomus scotti and Nototheniops larseni.", "url": "https://www.usap-dc.org/view/dataset/601536"}, {"dataset_uid": "601537", "doi": "10.15784/601537", "keywords": "Alveolata; Antarctica; Antarctic Peninsula; Notoxcellia Coronata; Notoxcellia Picta; Perkinsozoa; Xcellidae", "people": "Fontenele, Rafaela S. ; Kraberger, Simona ; Varsani, Arvind; Postlethwait, John; Desvignes, Thomas", "repository": "USAP-DC", "science_program": null, "title": "Metagenomic analysis of apparently healthy and tumor samples using Kaiju software ", "url": "https://www.usap-dc.org/view/dataset/601537"}, {"dataset_uid": "601538", "doi": "10.15784/601538", "keywords": "Alveolata; Antarctica; Antarctic Peninsula; Notoxcellia Coronata; Notoxcellia Picta; Perkinsozoa; Xcellidae", "people": "Postlethwait, John; Desvignes, Thomas; Lauridsen, Henrik", "repository": "USAP-DC", "science_program": null, "title": "microMRI analyses of Trematomus scotti Tsco_18_08 with X-cell xenomas", "url": "https://www.usap-dc.org/view/dataset/601538"}, {"dataset_uid": "601539", "doi": "10.15784/601539", "keywords": "Alveolata; Antarctica; Antarctic Peninsula; Notoxcellia Coronata; Notoxcellia Picta; Perkinsozoa; Xcellidae", "people": "Postlethwait, John; Desvignes, Thomas", "repository": "USAP-DC", "science_program": null, "title": "In situ hybridization of X-cell and host fish 18S SSU rRNA in alternate sections of tumor xenomas.", "url": "https://www.usap-dc.org/view/dataset/601539"}, {"dataset_uid": "601917", "doi": "10.15784/601917", "keywords": "Alveolata; Antarctic; Cryosphere; Notoxcellia Coronata; Notoxcellia Picta; Perkinsozoa; Xcellidae", "people": "P\u00e9ron, Clara; Devine, Jennifer; Postlethwait, John; Desvignes, Thomas", "repository": "USAP-DC", "science_program": null, "title": "Similarity matrices of Notoxcellia spp.", "url": "https://www.usap-dc.org/view/dataset/601917"}, {"dataset_uid": "601916", "doi": "10.15784/601916", "keywords": "Alveolata; Antarctica; Cryosphere; Notoxcellia Coronata; Notoxcellia Picta; Perkinsozoa; Ross Sea; Xcellidae", "people": "P\u00e9ron, Clara; Postlethwait, John; Desvignes, Thomas; Devine, Jennifer", "repository": "USAP-DC", "science_program": null, "title": "Gonad and skin histology of Trematomus loennbergii infected by Notoxcellia sp.", "url": "https://www.usap-dc.org/view/dataset/601916"}, {"dataset_uid": "200277", "doi": "", "keywords": null, "people": null, "repository": "NCBI SRA", "science_program": null, "title": "Raw Illumina sequencing reads from skin tumors and visually healthy skins from Trematomus scotti and Nototheniops larseni", "url": "https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA789574"}, {"dataset_uid": "200276", "doi": "", "keywords": null, "people": null, "repository": "GenBank", "science_program": null, "title": "18 SSU rDNA type sequences for Notoxcellia picta (nov. sp.)", "url": "https://www.ncbi.nlm.nih.gov/nuccore/OL630145"}, {"dataset_uid": "200275", "doi": "", "keywords": null, "people": null, "repository": "GenBank", "science_program": null, "title": "18 SSU rDNA type sequences for Notoxcellia coronata (nov. sp.)", "url": "https://www.ncbi.nlm.nih.gov/nuccore/OL630144"}, {"dataset_uid": "601915", "doi": "10.15784/601915", "keywords": "Alveolata; Antarctic; Cryosphere; Notoxcellia Coronata; Notoxcellia Picta; Perkinsozoa; Xcellidae", "people": "Devine, Jennifer; Desvignes, Thomas; P\u00e9ron, Clara; Postlethwait, John", "repository": "USAP-DC", "science_program": null, "title": "Phylogenetic Analysis of Notoxcellia species, including novel Ross Sea specimen", "url": "https://www.usap-dc.org/view/dataset/601915"}, {"dataset_uid": "200262", "doi": "", "keywords": null, "people": null, "repository": "MorphoSource", "science_program": null, "title": "Trematomus scotti with X-cell xenomas", "url": "https://www.morphosource.org/projects/000405843?locale=en"}], "date_created": "Thu, 01 Jul 2021 00:00:00 GMT", "description": "Antarctica\u2019s native animals face increasing stressors from warming oceans. A key unanswered question is how Antarctic life will respond. If warmer waters contribute to fish disease susceptibility, then iconic Antarctic predators they support, including penguins, seals, and killer whales, will suffer. A recent scientific cruise on the Antarctic peninsula encountered a population of crowned notothen fish that were plagued by pink, wart-like tumors that covered 10% to 30% of the body surface on about a third of the animals. Similar tumors had not previously been reported, suggesting that this might be a new disease that threatens Antarctic fish. The goal of proposed work is to identify the biological origins of the tumor and how it affects cell function and organismal physiology. The work is potentially transformative because it studies what might be a harbinger of Antarctic fish responses to global climate change. The project has several Broader Impacts. First, it will publicize the tumors. Because Antarctic researchers have never reported a tumor epidemic, the community must become aware of the outbreak and the tumor\u2019s distinct diagnostic features. Second, dissemination of project results will stir further research to determine if this is an isolated event or is becoming a general phenomenon, and thus a broad concern for Antarctic ecosystems. Third, assays the project develops to detect the disease will enhance research infrastructure. Finally, work will broaden the nation\u2019s scientific workforce by providing authentic research experiences for high school students and undergraduates from groups underrepresented in scientific research. The overall goal of proposed work is to identify the biological origins of the neoplasia and how it affects cell function and physiology. Aim 1 is to identify the pathogenic agent. Aim 1a is to test the hypothesis that a virus causes the neoplasia by isolating and sequencing viral nucleic acids from neoplasias and from animals that are not visibly affected. Aim 1b is to test neoplasias for bacteria, fungi, protozoa, or invertebrate parasites not present in healthy skin. Aim 2 is to learn how the disease alters the biology of affected cells. Aim 2a is to examine histological sections of affected and control tissues to see if the neoplasias are similar to previously reported skin diseases in temperate water fishes. Aim 2b is to examine the function of neoplastic cells by RNA-seq transcriptomics to identify genes that are differentially expressed in neoplasias and normal skin. Achieving these Aims will advance knowledge by identifying the causes and consequences of an outbreak of neoplasias in Antarctic fish. Proposed work is significant because it is the first to investigate a neoplasia cluster in Antarctic fish. This award reflects NSF\u0027s statutory mission and has been deemed worthy of support through evaluation using the Foundation\u0027s intellectual merit and broader impacts review criteria.", "east": -62.3, "geometry": "POINT(-63.8 -64.15)", "instruments": null, "is_usap_dc": true, "keywords": "FIELD SURVEYS; Andvord Bay; Amd/Us; PROTISTS; BENTHIC; FISH; Dallmann Bay; USAP-DC; NSF/USA; AMD", "locations": "Andvord Bay; Dallmann Bay", "north": -63.3, "nsf_funding_programs": "Antarctic Organisms and Ecosystems", "paleo_time": null, "persons": "Postlethwait, John; Varsani, Arvind; Desvignes, Thomas", "platforms": "LAND-BASED PLATFORMS \u003e FIELD SITES \u003e FIELD SURVEYS", "repo": "USAP-DC", "repositories": "GenBank; MorphoSource; NCBI SRA; R2R; USAP-DC; ZooBank", "science_programs": null, "south": -65.0, "title": "EAGER: Origin and Physiological Consequences of a Neoplasm Outbreak in Antarctic Fish ", "uid": "p0010221", "west": -65.3}, {"awards": "1850988 Teets, Nicholas", "bounds_geometry": "POLYGON((-64.366767 -62.68104,-63.9917036 -62.68104,-63.6166402 -62.68104,-63.2415768 -62.68104,-62.8665134 -62.68104,-62.49145 -62.68104,-62.1163866 -62.68104,-61.7413232 -62.68104,-61.3662598 -62.68104,-60.9911964 -62.68104,-60.616133 -62.68104,-60.616133 -62.9537037,-60.616133 -63.2263674,-60.616133 -63.4990311,-60.616133 -63.7716948,-60.616133 -64.0443585,-60.616133 -64.3170222,-60.616133 -64.5896859,-60.616133 -64.8623496,-60.616133 -65.1350133,-60.616133 -65.407677,-60.9911964 -65.407677,-61.3662598 -65.407677,-61.7413232 -65.407677,-62.1163866 -65.407677,-62.49145 -65.407677,-62.8665134 -65.407677,-63.2415768 -65.407677,-63.6166402 -65.407677,-63.9917036 -65.407677,-64.366767 -65.407677,-64.366767 -65.1350133,-64.366767 -64.8623496,-64.366767 -64.5896859,-64.366767 -64.3170222,-64.366767 -64.0443585,-64.366767 -63.7716948,-64.366767 -63.4990311,-64.366767 -63.2263674,-64.366767 -62.9537037,-64.366767 -62.68104))", "dataset_titles": "Belgica antarctica collection sites - Summer 2023/2024 field season; Cold and dehydration tolerance of Belgica antarctica from three distinct geographic locations; Cross-tolerance in Belgica antarctica near Palmer Peninsula; Data from Edgington, H., Pavinato, V.A.C., Spacht, D., Gantz, J.D., Convey, P., Lee, R.E., Denlinger, D.L., Michel, A., 2023. Genetic history, structure and gene flow among populations of Belgica antarctica, the only free-living insect in the western Antarctic Peninsula. Polar Science 36, 100945.; Data from microplastics exposure in Belgica antarctica; Fine\u2011scale variation in microhabitat conditions influences physiology and metabolism in an Antarctic insect; Information on 2023 collection sites for Belgica antarctica; LMG2002 Expedtition Data; Long-term recovery from freezing in Belgica antarctica; Multiple stress tolerance in the Antarctic midge; Simulated winter warming negatively impacts survival of Antarcticas only endemic insect; Stress tolerance in Belgica antarctica and Eretmoptera murphyi; Temporal and spatial variation in stress tolerance in Belgica antarctica populations from distinct islands", "datasets": [{"dataset_uid": "200425", "doi": "", "keywords": null, "people": null, "repository": "USAP-DC", "science_program": null, "title": "Simulated winter warming negatively impacts survival of Antarcticas only endemic insect", "url": "https://www.usap-dc.org/view/dataset/601694"}, {"dataset_uid": "601687", "doi": "10.15784/601687", "keywords": "Antarctica; Antarctic Peninsula; Belgica Antarctica; Biota; Sample Location", "people": "Sousa Lima, Cleverson; Peter, Convey; Michel, Andrew; Teets, Nicholas; Devlin, Jack; Kawarasaki, Yuta; Gantz, Joseph; Pavinato, Vitor", "repository": "USAP-DC", "science_program": null, "title": "Information on 2023 collection sites for Belgica antarctica", "url": "https://www.usap-dc.org/view/dataset/601687"}, {"dataset_uid": "601698", "doi": "10.15784/601698", "keywords": "Antarctica; Belgica Antarctica; Palmer Station", "people": "Teets, Nicholas; Devlin, Jack; Lecheta, Melise; Sousa Lima, Cleverson", "repository": "USAP-DC", "science_program": null, "title": "Long-term recovery from freezing in Belgica antarctica", "url": "https://www.usap-dc.org/view/dataset/601698"}, {"dataset_uid": "601865", "doi": "10.15784/601865", "keywords": "Antarctica; Antarctic Peninsula; Cryosphere; Seasonality", "people": "Gantz, Josiah D.; Denlinger, David; Devlin, Jack; McCabe, Eleanor; Teets, Nicholas; Lee, Richard; Spacht, Drew", "repository": "USAP-DC", "science_program": null, "title": "Fine\u2011scale variation in microhabitat conditions influences physiology and metabolism in an Antarctic insect", "url": "https://www.usap-dc.org/view/dataset/601865"}, {"dataset_uid": "601864", "doi": "10.15784/601864", "keywords": "Antarctica; Antarctic Peninsula; Cryosphere", "people": "Kawarasaki, Yuta; Teets, Nicholas", "repository": "USAP-DC", "science_program": null, "title": "Cold and dehydration tolerance of Belgica antarctica from three distinct geographic locations", "url": "https://www.usap-dc.org/view/dataset/601864"}, {"dataset_uid": "601871", "doi": "10.15784/601871", "keywords": "Antarctica; Belgica Antarctica; Cryosphere", "people": "Devlin, Jack; Michel, Andrew; Teets, Nicholas; Sousa Lima, Cleverson; Kawarasaki, Yuta; Hayward, Scott; Aquilino, Monica; Pavinato, Vitor; Gantz, Josiah D.", "repository": "USAP-DC", "science_program": null, "title": "Stress tolerance in Belgica antarctica and Eretmoptera murphyi", "url": "https://www.usap-dc.org/view/dataset/601871"}, {"dataset_uid": "601872", "doi": "10.15784/601872", "keywords": "Antarctica; Belgica Antarctica; Cryosphere", "people": "Teets, Nicholas; Sousa Lima, Cleverson; Michel, Andrew; Hayward, Scott; Colinet, Herve", "repository": "USAP-DC", "science_program": null, "title": "Cross-tolerance in Belgica antarctica near Palmer Peninsula", "url": "https://www.usap-dc.org/view/dataset/601872"}, {"dataset_uid": "601873", "doi": "10.15784/601873", "keywords": "Antarctica; Belgica Antarctica; Cryosphere; Population Genetics", "people": "Hayward, Scott; Teets, Nicholas; Michel, Andrew; Sousa Lima, Cleverson", "repository": "USAP-DC", "science_program": null, "title": "Temporal and spatial variation in stress tolerance in Belgica antarctica populations from distinct islands", "url": "https://www.usap-dc.org/view/dataset/601873"}, {"dataset_uid": "601875", "doi": "10.15784/601875", "keywords": "Antarctica; Cryosphere", "people": "Hayward, Scott; Sousa Lima, Cleverson; Michel, Andrew; Teets, Nicholas", "repository": "USAP-DC", "science_program": null, "title": "Belgica antarctica collection sites - Summer 2023/2024 field season", "url": "https://www.usap-dc.org/view/dataset/601875"}, {"dataset_uid": "200222", "doi": "10.7284/908802", "keywords": null, "people": null, "repository": "R2R", "science_program": null, "title": "LMG2002 Expedtition Data", "url": "https://www.rvdata.us/search/cruise/LMG2002"}, {"dataset_uid": "200437", "doi": "", "keywords": null, "people": null, "repository": "USAP-DC", "science_program": null, "title": "Stress tolerance in Belgica antarctica and Eretmoptera murphyi", "url": "https://www.usap-dc.org/view/dataset/601874"}, {"dataset_uid": "200438", "doi": "", "keywords": null, "people": null, "repository": "NCBI", "science_program": null, "title": "Data from Edgington, H., Pavinato, V.A.C., Spacht, D., Gantz, J.D., Convey, P., Lee, R.E., Denlinger, D.L., Michel, A., 2023. Genetic history, structure and gene flow among populations of Belgica antarctica, the only free-living insect in the western Antarctic Peninsula. Polar Science 36, 100945.", "url": "https://www.ncbi.nlm.nih.gov/bioproject/PRJNA565153/"}, {"dataset_uid": "601866", "doi": "10.15784/601866", "keywords": "Antarctica; Antarctic Peninsula; Cryosphere", "people": "Teets, Nicholas; Devlin, Jack", "repository": "USAP-DC", "science_program": null, "title": "Data from microplastics exposure in Belgica antarctica", "url": "https://www.usap-dc.org/view/dataset/601866"}, {"dataset_uid": "601867", "doi": "10.15784/601867", "keywords": "Antarctica; Antarctic Peninsula; Cryosphere", "people": "Teets, Nicholas", "repository": "USAP-DC", "science_program": null, "title": "Multiple stress tolerance in the Antarctic midge", "url": "https://www.usap-dc.org/view/dataset/601867"}], "date_created": "Fri, 25 Jun 2021 00:00:00 GMT", "description": "The cold, dry terrestrial environments of Antarctica are inhospitable for insects, and only three midge species make Antarctica home. Of these, Belgica antarctica is the only species found exclusively in Antarctica, and it has been a resident of Antarctica since the continent split from South America ~30 million years ago. Thus, this species is an excellent system to model the biological history of Antarctica throughout its repeated glaciation events and shifts in climate. This insect is also a classic example of extreme adaptation, and much previous work has focused on identifying the genetic and physiological mechanisms that allow this species to survive where no other insect is capable. However, it has been difficult to pinpoint the unique evolutionary adaptations that are required to survive in Antarctica due to a lack of information from closely related Antarctic and sub-Antarctic species. This project will compare adaptations, genome sequences, and population characteristics of four midge species that span an environmental gradient from sub-Antarctic to Antarctic habitats. In addition to B. antarctica, these species include two species that are strictly sub-Antarctic and a third that is native to the sub-Antarctic but has invaded parts of Antarctica. The researchers, comprised of scientists from the US, UK, Chile, and France, will sample insects from across their geographic range and measure their ability to tolerate environmental stressors (i.e., cold and desiccation), quantify molecular responses to stress, and compare the makeup of the genome and patterns of genetic diversity. This research will contribute to a greater understanding of adaptation to extremes, to an understanding of biodiversity on the planet and to understanding and predicting changes accompanying environmental change. The project will train two graduate students and two postdoctoral researchers, and a K-12 educator will be a member of the field team and will assist with fieldwork and facilitate outreach with schools in the US. The project includes partnership activities with several STEM education organizations to deliver educational content to K-12 and secondary students. This is a project that is jointly funded by the National Science Foundation\u0027s Directorate of Geosciences (NSF/GEO) and the National Environment Research Council (NERC) of the United Kingdom (UK) via the NSF/GEO-NERC Lead Agency Agreement. This Agreement allows a single joint US/UK proposal to be submitted and peer-reviewed by the Agency whose investigator has the largest proportion of the budget. Each Agency funds the proportion of the budget and the investigators associated with its own country. UK participation in this project includes deploying scientists as part of the field team, supporting field and sampling logistics at remote Antarctic sites, and genome sequencing, annotation, and analyses. This project focuses on the key physiological adaptations and molecular processes that allow a select few insect species to survive in Antarctica. The focal species are all wingless with limited dispersal capacity, suggesting there is also significant potential to locally adapt to variable environmental conditions across the range of these species. The central hypothesis is that similar molecular mechanisms drive both population-level adaptation to local environmental conditions and macroevolutionary changes across species living in different environments. The specific aims of the project are to 1) Characterize conserved and species-specific adaptations to extreme environments through comparative physiology and transcriptomics, 2) Compare the genome sequences of these species to identify genetic signatures of extreme adaption, and 3) Investigate patterns of diversification and local adaptation across each species? range using population genomics. The project establishes an international collaboration of researchers from the US, UK, Chile, and France with shared interests and complementary expertise in the biology, genomics, and conservation of Antarctic arthropods. The Broader Impacts of the project include training students and partnering with the Living Arts and Science Center to design and implement educational content for K-12 students. This award reflects NSF\u0027s statutory mission and has been deemed worthy of support through evaluation using the Foundation\u0027s intellectual merit and broader impacts review criteria.", "east": -60.616133, "geometry": "POINT(-62.49145 -64.0443585)", "instruments": null, "is_usap_dc": true, "keywords": "Antarctic Peninsula; Livingston Island; Antarctica; USAP-DC; AMD; R/V LMG; USA/NSF; ARTHROPODS; Amd/Us; Anvers Island", "locations": "Antarctica; Antarctic Peninsula; Anvers Island; Livingston Island", "north": -62.68104, "nsf_funding_programs": "Antarctic Organisms and Ecosystems", "paleo_time": null, "persons": "Teets, Nicholas; Michel, Andrew", "platforms": "WATER-BASED PLATFORMS \u003e VESSELS \u003e SURFACE \u003e R/V LMG", "repo": "USAP-DC", "repositories": "NCBI; R2R; USAP-DC", "science_programs": null, "south": -65.407677, "title": "NSFGEO-NERC: Mechanisms of Adaptation to Terrestrial Antarctica through Comparative Physiology and Genomics of Antarctic and sub-Antarctic Insects", "uid": "p0010203", "west": -64.366767}, {"awards": "1341339 Baker, Bill; 1341333 McClintock, James", "bounds_geometry": "POLYGON((-65 -65,-64.8 -65,-64.6 -65,-64.4 -65,-64.2 -65,-64 -65,-63.8 -65,-63.6 -65,-63.4 -65,-63.2 -65,-63 -65,-63 -64.9,-63 -64.8,-63 -64.7,-63 -64.6,-63 -64.5,-63 -64.4,-63 -64.3,-63 -64.2,-63 -64.1,-63 -64,-63.2 -64,-63.4 -64,-63.6 -64,-63.8 -64,-64 -64,-64.2 -64,-64.4 -64,-64.6 -64,-64.8 -64,-65 -64,-65 -64.1,-65 -64.2,-65 -64.3,-65 -64.4,-65 -64.5,-65 -64.6,-65 -64.7,-65 -64.8,-65 -64.9,-65 -65))", "dataset_titles": "Data from Amsler et al. 2019 Antarctic Science; Plocamium cartilagineum field chemotyping; Plocamium reproductive system data and R code; Plocamium transect and transplant data; Raw gastropod collection data from Amsler et al. 2022 Antarctic Science; Supplementary information provided with Murray et al.: Discovery of an Antarctic ascidian-associated uncultivated Verrucomicrobia with antimelanoma palmerolide biosynthetic potential; Synoicum adareanum sampling underwater video Mar 2011 Palmer Station Antarctica; The Chemical Ecology of Shallow-water Marine Macroalgae and Invertebrates on the Antarctic Peninsula - 2010 experimental data; The Chemical Ecology of Shallow-water Marine Macroalgae and Invertebrates on the Antarctic Peninsula - 2010 field data; The Chemical Ecology of Shallow-water Marine Macroalgae and Invertebrates on the Antarctic Peninsula - 2011 Clad Outplant; The Chemical Ecology of Shallow-water Marine Macroalgae and Invertebrates on the Antarctic Peninsula - 2013 Chemo Phylo data", "datasets": [{"dataset_uid": "600047", "doi": "10.15784/600047", "keywords": "Antarctica; Biota; Oceans; Southern Ocean", "people": "Baker, Bill", "repository": "USAP-DC", "science_program": null, "title": "The Chemical Ecology of Shallow-water Marine Macroalgae and Invertebrates on the Antarctic Peninsula - 2010 experimental data", "url": "https://www.usap-dc.org/view/dataset/600047"}, {"dataset_uid": "601215", "doi": "10.15784/601215", "keywords": "Algae; Antarctica; Biota; Chemical Ecology; Chemotyping; Halogenated Monoterpenes; Natural Products; Oceans; Palmer Station; Plocamium Cartilagineum; Southern Ocean; Terpenes", "people": "Baker, Bill", "repository": "USAP-DC", "science_program": null, "title": "Plocamium cartilagineum field chemotyping", "url": "https://www.usap-dc.org/view/dataset/601215"}, {"dataset_uid": "601622", "doi": "10.15784/601622", "keywords": "Antarctica; Benthic; Biota; Macroalgae; Population Genetics", "people": "Amsler, Charles", "repository": "USAP-DC", "science_program": null, "title": "Plocamium reproductive system data and R code", "url": "https://www.usap-dc.org/view/dataset/601622"}, {"dataset_uid": "601533", "doi": "10.15784/601533", "keywords": "Antarctica; Benthos; Palmer Station", "people": "Amsler, Charles", "repository": "USAP-DC", "science_program": null, "title": "Raw gastropod collection data from Amsler et al. 2022 Antarctic Science", "url": "https://www.usap-dc.org/view/dataset/601533"}, {"dataset_uid": "600096", "doi": "10.15784/600096", "keywords": "Algae; Antarctica; Antarctic Peninsula; Biota; Oceans; Southern Ocean", "people": "Baker, Bill", "repository": "USAP-DC", "science_program": null, "title": "The Chemical Ecology of Shallow-water Marine Macroalgae and Invertebrates on the Antarctic Peninsula - 2013 Chemo Phylo data", "url": "https://www.usap-dc.org/view/dataset/600096"}, {"dataset_uid": "600046", "doi": "10.15784/600046", "keywords": "Antarctica; Biota; Oceans; Southern Ocean", "people": "Amsler, Charles; McClintock, James", "repository": "USAP-DC", "science_program": null, "title": "The Chemical Ecology of Shallow-water Marine Macroalgae and Invertebrates on the Antarctic Peninsula - 2010 field data", "url": "https://www.usap-dc.org/view/dataset/600046"}, {"dataset_uid": "200356", "doi": "10.5061/dryad.8sf7m0cpp", "keywords": null, "people": null, "repository": "Dryad", "science_program": null, "title": "Supplementary information provided with Murray et al.: Discovery of an Antarctic ascidian-associated uncultivated Verrucomicrobia with antimelanoma palmerolide biosynthetic potential", "url": "https://datadryad.org/stash/dataset/doi:10.5061/dryad.8sf7m0cpp"}, {"dataset_uid": "601621", "doi": "10.15784/601621", "keywords": "Antarctica; Benthic; Biota; Macroalgae; Mesograzer; Microscopy; Oceans; Secondary Metabolites", "people": "Amsler, Charles", "repository": "USAP-DC", "science_program": null, "title": "Plocamium transect and transplant data", "url": "https://www.usap-dc.org/view/dataset/601621"}, {"dataset_uid": "601159", "doi": "601159", "keywords": "Antarctica; Benthic; Biota; Macroalgae; Mesograzer; Microscopy; Oceans; Zooplankton", "people": "Amsler, Charles", "repository": "USAP-DC", "science_program": null, "title": "Data from Amsler et al. 2019 Antarctic Science", "url": "https://www.usap-dc.org/view/dataset/601159"}, {"dataset_uid": "600095", "doi": "10.15784/600095", "keywords": "Algae; Antarctica; Antarctic Peninsula; Biota; Oceans; Southern Ocean", "people": "McClintock, James; Amsler, Charles", "repository": "USAP-DC", "science_program": null, "title": "The Chemical Ecology of Shallow-water Marine Macroalgae and Invertebrates on the Antarctic Peninsula - 2011 Clad Outplant", "url": "https://www.usap-dc.org/view/dataset/600095"}, {"dataset_uid": "200357", "doi": "10.5061/dryad.gxd2547gw", "keywords": null, "people": null, "repository": "Dryad", "science_program": null, "title": "Synoicum adareanum sampling underwater video Mar 2011 Palmer Station Antarctica", "url": "https://datadryad.org/stash/dataset/doi:10.5061/dryad.gxd2547gw"}], "date_created": "Tue, 05 Mar 2019 00:00:00 GMT", "description": "The coastal environments of the western Antarctic Peninsula harbor rich assemblages of marine animals and algae. The importance of the interactions between these groups of organisms in the ecology of coastal Antarctica are well known and often mediated by chemical defenses in the tissues of the algae. These chemicals are meant to deter feeding by snails and other marine animals making the Antarctic Peninsula an excellent place to ask important questions about the functional and evolutionary significance of chemical compound diversity for marine communities. This project will focus on three main objectives: the first objective is to expand the current understanding of the relationship between algae and their associated marine animals. The second objective focuses on the diversity of chemical compounds used to defend algae from being consumed. The third objective seeks to understand how marine animals can benefit from these compounds by consuming the algae that contain them, and then using those compounds to chemically deter predators. The field components of this research will be performed during three expeditions to the US Palmer Station, Antarctica. During these expeditions, a variety of laboratory feeding bioassays, manipulative field and laboratory experiments, and on-site chemical analyses will be performed. The investigators will also foster opportunities to integrate their NSF research with a variety of educational activities. As in the past they will support undergraduate research, both through NSF programs as well as home, university-based, programs, and they will also continue to support and foster graduate education. Through their highly successful University of Alabama in Antarctica interactive web program (two time recipient of awards of excellence from the US Council for Advancement and Support of Education), they will continue to involve large numbers of teachers, K-12 students, and other members of the community at large in their scientific endeavors in Antarctica. In addition, the investigators have hosted K-12 teachers on their Antarctic field teams through the former NSF Teachers Experiencing Antarctica and the Arctic program and will pursue participation in PolarTREC, the successor to this valuable program. Moreover, they will actively participate in outreach efforts by presenting numerous talks on their research to local school and community groups. The near shore environments of the western Antarctic Peninsula harbor rich assemblages of macroalgae and macroinvertebrates. The importance of predator-prey interactions and chemical defenses in mediating community-wide trophic interactions makes the western Antarctic Peninsula an excellent place to ask important questions about the functional and evolutionary significance of defensive compound diversity for marine communities. This project will focus on three main objectives which are a direct outcome of the past studies of the chemical ecology of shallow-water marine macroalgae and invertebrates on the Antarctic Peninsula by this group of investigators. The first objective is to expand the current understanding of a community-wide mutualism between macroalgae and their associated amphipods to include gastropods, which are also abundant on many macroalgae. The second objective focuses on the diversity of chemical compounds used to defend macroalgae from being consumed, particularly in the common red alga Plocamium cartilagineum. The third objective seeks to understand the relationship between P. cartilagineum and the amphipod Paradexamine fissicauda, including the ecological benefits and costs to P. fissicauda resulting from the ability to consume P. cartilagineum and other chemically defended red algae. The investigators will focus on the costs and benefits related to the ability of P. fissicauda to sequester defensive compounds from the alga P. cartilagineum and use those chemicals to defend itself from predation. The field components of this research will be performed during three expeditions to Palmer Station, Antarctica. During these expeditions, a variety of laboratory feeding bioassays, manipulative field and laboratory experiments, and on-site chemical analyses will be performed. Phylogenetic analyses, detailed secondary metabolite chemical analyses and purifications, and other data analyses will also be performed at the investigators\u0027 home institutions between and after their field seasons.", "east": -63.0, "geometry": "POINT(-64 -64.5)", "instruments": null, "is_usap_dc": true, "keywords": "FIELD INVESTIGATION; Antarctica; BENTHIC; USAP-DC", "locations": "Antarctica", "north": -64.0, "nsf_funding_programs": "Antarctic Organisms and Ecosystems; Antarctic Organisms and Ecosystems", "paleo_time": null, "persons": "Amsler, Charles; Baker, Bill; McClintock, James", "platforms": "LAND-BASED PLATFORMS \u003e FIELD SITES \u003e FIELD INVESTIGATION", "repo": "USAP-DC", "repositories": "Dryad; USAP-DC", "science_programs": null, "south": -65.0, "title": "Collaborative Research: The Chemical Ecology of Shallow-water Marine Macroalgae and Invertebrates on the Antarctic Peninsula - continuing", "uid": "p0010016", "west": -65.0}]

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