USAP-DC

{"dp_type": "Project", "free_text": "NSF/USA"}

[{"awards": "2032029 Gerken, Sarah", "bounds_geometry": null, "dataset_titles": null, "datasets": null, "date_created": "Mon, 13 Jun 2022 00:00:00 GMT", "description": "Ocean communities play an important role in determining the natural and human impacts of global change. The most conspicuous members of those communities are generally large vertebrates such as marine mammals and sea birds. But smaller animals often determine how the changes impact those charismatic animals. In the Antarctic, where some of the most dramatic physical changes are taking place, we do not know much about what small animals exist. This project will sample the sub-Antarctic and three different Antarctic seas with a hope of identifying, quantifying and discovering the variation in species of a group of small invertebrates. Comma shrimp, also called cumaceans, are rarely seen elsewhere but may be common and important in the communities of these locations. Antarctic sampling traditionally used gear that was not very effective at catching cumaceans so we do not know what species exist there and how common they are. This study will utilize modern sampling methods that will allow comma shrimp to be sampled. This will lead to discoveries about the diversity and abundance of comma shrimp, as well as their relationship to other invertebrate species. Major impacts of this work will be an enhancement of museum collections, the development of description of all the comma shrimp of Antarctica including new and unnamed species. Those contributions may be especially important as we strive to understand what drives the dynamics of charismatic vertebrates and fisheries that are tied to Antarctic food webs. \u003cbr/\u003e\u003cbr/\u003eThis project will collect cumaceans from benthic samples from the Antarctic peninsula, Bransfield Strait, and the Weddell Sea using benthic sleds, boxcores and megacores. Specimens will be fixed in 95% ethanol, preserved in 95% ethanol and 5% glycerin to preserve both morphology and DNA, and some specimens will be partially or wholly preserved in RNALater to preserve RNA and DNA. The specimens will form the basis for a monograph synthesizing current knowledge on the Subantarctic and Antarctic Cumacea, including diagnoses of all species, descriptions of new species, additional description for currently unknown life stages of known species, and vouchered gene sequences for all species collected. The monograph will include keys to all families, genera and species known from the region. Monographic revisions that include identification resources are typically useful for decades to a broad spectrum of other scientists.\u003cbr/\u003e\u003cbr/\u003eThis award reflects NSF\u0027s statutory mission and has been deemed worthy of support through evaluation using the Foundation\u0027s intellectual merit and broader impacts review criteria.", "east": null, "geometry": null, "instruments": null, "is_usap_dc": true, "keywords": "AMD/US; AMD; NSF/USA; ANIMALS/INVERTEBRATES; SHIPS; USAP-DC; Weddell Sea; Antarctic Peninsula", "locations": "Antarctic Peninsula; Weddell Sea", "north": null, "nsf_funding_programs": "Antarctic Organisms and Ecosystems", "paleo_time": null, "persons": "Gerken, Sarah", "platforms": "WATER-BASED PLATFORMS \u003e VESSELS \u003e SURFACE \u003e SHIPS", "repositories": null, "science_programs": null, "south": null, "title": "RAPID: Monographing the Antarctic and Subantarctic Cumacea", "uid": "p0010338", "west": null}, {"awards": "1643436 Donohoe, Aaron", "bounds_geometry": "POLYGON((-180 -60,-144 -60,-108 -60,-72 -60,-36 -60,0 -60,36 -60,72 -60,108 -60,144 -60,180 -60,180 -63,180 -66,180 -69,180 -72,180 -75,180 -78,180 -81,180 -84,180 -87,180 -90,144 -90,108 -90,72 -90,36 -90,0 -90,-36 -90,-72 -90,-108 -90,-144 -90,-180 -90,-180 -87,-180 -84,-180 -81,-180 -78,-180 -75,-180 -72,-180 -69,-180 -66,-180 -63,-180 -60))", "dataset_titles": "Partionining of CERES planetary albedo between atmospheric and surface reflection", "datasets": [{"dataset_uid": "601579", "doi": "10.15784/601579", "keywords": "Antarctica; Cryosphere; Southern Ocean", "people": "Donohoe, Aaron", "repository": "USAP-DC", "science_program": null, "title": "Partionining of CERES planetary albedo between atmospheric and surface reflection", "url": "https://www.usap-dc.org/view/dataset/601579"}], "date_created": "Fri, 10 Jun 2022 00:00:00 GMT", "description": "The key scientific question of this project is: what mechanism is the dominant driver of Southern Ocean (SO) sea ice variability and long-term trends in nature? Our primary goal is to understand the processes that drive SO sea ice loss over the observational record and identify which models get the physics right. Although our primary focus is on mechanisms of long-term sea ice loss, the observational record includes rich information at shorter timescales which are better sampled and may elucidate the relevant physics. Thus, our analysis of mechanisms of sea ice variability spans time scales ranging from days (synoptic) to inter-annual variability to long-term trends to identify model biases in the physics that drive SO sea ice loss events.\r\n\r\nWe divided our work into explorations of 5 major topics \r\n1. Identifying model biases in high frequency sea ice variability in the Southern Ocean\r\n2. Identifying model biases in radiative impact of sea ice loss events\r\n3. Disentangling the roles of winds and sea surface temperature on the observational record of Southern Ocean sea ice\r\n4. Quantifying the degree to which Southern Ocean sea ice loss is remotely forced by the influence of the tropics and mid-latitudes and, conversely, how much much influence does the Southern Ocean have on the tropics \r\n5. Analyzing the impact of atmospheric heat transport on sea ice loss \r\n", "east": 180.0, "geometry": "POINT(0 -89.999)", "instruments": null, "is_usap_dc": true, "keywords": "USAP-DC; AMD; AMD/US; SEA ICE; United States Of America; COMPUTERS; ATMOSPHERIC WINDS; ATMOSPHERIC RADIATION; NSF/USA", "locations": "United States Of America", "north": -60.0, "nsf_funding_programs": "Antarctic Ocean and Atmospheric Sciences", "paleo_time": null, "persons": "Donohoe, Aaron; Schweiger, Axel", "platforms": "OTHER \u003e MODELS \u003e COMPUTERS", "repo": "USAP-DC", "repositories": "USAP-DC", "science_programs": null, "south": -90.0, "title": "What Processes Drive Southern Ocean Sea Ice Variability and Trends? Insights from the Energy Budget of the Coupled Cryosphere-ocean-atmosphere System", "uid": "p0010336", "west": -180.0}, {"awards": "1947040 Varsani, Arvind", "bounds_geometry": "POLYGON((-65.3 -63.3,-65 -63.3,-64.7 -63.3,-64.4 -63.3,-64.1 -63.3,-63.8 -63.3,-63.5 -63.3,-63.2 -63.3,-62.9 -63.3,-62.6 -63.3,-62.3 -63.3,-62.3 -63.47,-62.3 -63.64,-62.3 -63.81,-62.3 -63.98,-62.3 -64.15,-62.3 -64.32,-62.3 -64.49,-62.3 -64.66,-62.3 -64.83,-62.3 -65,-62.6 -65,-62.9 -65,-63.2 -65,-63.5 -65,-63.8 -65,-64.1 -65,-64.4 -65,-64.7 -65,-65 -65,-65.3 -65,-65.3 -64.83,-65.3 -64.66,-65.3 -64.49,-65.3 -64.32,-65.3 -64.15,-65.3 -63.98,-65.3 -63.81,-65.3 -63.64,-65.3 -63.47,-65.3 -63.3))", "dataset_titles": "18 SSU rDNA type sequences for Notoxcellia coronata (nov. sp.); 18 SSU rDNA type sequences for Notoxcellia picta (nov. sp.); Fish pictures and skin pathology of X-cell infection in Trematomus scotti.; Histopathology of X-cell xenomas in Trematomus scotti and Nototheniops larseni.; In situ hybridization of X-cell and host fish 18S SSU rRNA in alternate sections of tumor xenomas.; Metagenomic analysis of apparently healthy and tumor samples using Kaiju software ; microMRI analyses of Trematomus scotti Tsco_18_08 with X-cell xenomas; Morphological and pathological data of Trematomus scotti specimens captured on May 30th, 2018 in Andvord Bay.; Nomenclatural Act for the genus Notoxcellia; Nomenclatural Act for the species Notoxcellia coronata; Nomenclatural Act for the species Notoxcellia picta; Phylogenetic Analysis of Notoxcellia species.; Raw Illumina sequencing reads from skin tumors and visually healthy skins from Trematomus scotti and Nototheniops larseni; Temperature profiles at five fishing locations on the West Antarctic Peninsula during austral fall 2018.; Trematomus scotti with X-cell xenomas", "datasets": [{"dataset_uid": "601496", "doi": "10.15784/601496", "keywords": "Andvord Bay; Antarctica; Cryosphere; Fish", "people": "Postlethwait, John; Lauridsen, Henrik; Desvignes, Thomas", "repository": "USAP-DC", "science_program": null, "title": "Fish pictures and skin pathology of X-cell infection in Trematomus scotti.", "url": "https://www.usap-dc.org/view/dataset/601496"}, {"dataset_uid": "200384", "doi": "", "keywords": null, "people": null, "repository": "ZooBank", "science_program": null, "title": "Nomenclatural Act for the species Notoxcellia picta", "url": "https://zoobank.org/NomenclaturalActs/31062dd2-7202-47fa-86e0-7be5c55ac0e2"}, {"dataset_uid": "601501", "doi": "10.15784/601501", "keywords": "Alveolata; Antarctica; Antarctic Peninsula; Biology; Biosphere; Cryosphere; Notoxcellia coronata; Notoxcellia picta; Oceans; Perkinsozoa; Xcellidae", "people": "Postlethwait, John; Varsani, Arvind; Desvignes, Thomas", "repository": "USAP-DC", "science_program": null, "title": "Phylogenetic Analysis of Notoxcellia species.", "url": "https://www.usap-dc.org/view/dataset/601501"}, {"dataset_uid": "601494", "doi": "10.15784/601494", "keywords": "Andvord Bay; Antarctica; Cryosphere; Fish", "people": "Lauridsen, Henrik; Postlethwait, John; Le Francois, Nathalie; Desvignes, Thomas", "repository": "USAP-DC", "science_program": null, "title": "Morphological and pathological data of Trematomus scotti specimens captured on May 30th, 2018 in Andvord Bay.", "url": "https://www.usap-dc.org/view/dataset/601494"}, {"dataset_uid": "200275", "doi": "", "keywords": null, "people": null, "repository": "GenBank", "science_program": null, "title": "18 SSU rDNA type sequences for Notoxcellia coronata (nov. sp.)", "url": "https://www.ncbi.nlm.nih.gov/nuccore/OL630144"}, {"dataset_uid": "200276", "doi": "", "keywords": null, "people": null, "repository": "GenBank", "science_program": null, "title": "18 SSU rDNA type sequences for Notoxcellia picta (nov. sp.)", "url": "https://www.ncbi.nlm.nih.gov/nuccore/OL630145"}, {"dataset_uid": "601536", "doi": "10.15784/601536", "keywords": "Alveolata; Antarctica; Antarctic Peninsula; Cryosphere; Notoxcellia coronata; Notoxcellia picta; Perkinsozoa; Xcellidae", "people": "Murray, Katrina N. ; Desvignes, Thomas; Kent, Michael L. ; Postlethwait, John", "repository": "USAP-DC", "science_program": null, "title": "Histopathology of X-cell xenomas in Trematomus scotti and Nototheniops larseni.", "url": "https://www.usap-dc.org/view/dataset/601536"}, {"dataset_uid": "601537", "doi": "10.15784/601537", "keywords": "Alveolata; Antarctica; Antarctic Peninsula; Cryosphere; Notoxcellia coronata; Notoxcellia picta; Perkinsozoa; Xcellidae", "people": "Postlethwait, John; Desvignes, Thomas; Fontenele, Rafaela S. ; Kraberger, Simona ; Varsani, Arvind", "repository": "USAP-DC", "science_program": null, "title": "Metagenomic analysis of apparently healthy and tumor samples using Kaiju software ", "url": "https://www.usap-dc.org/view/dataset/601537"}, {"dataset_uid": "601538", "doi": "10.15784/601538", "keywords": "Alveolata; Antarctica; Antarctic Peninsula; Cryosphere; Notoxcellia coronata; Notoxcellia picta; Perkinsozoa; Xcellidae", "people": "Postlethwait, John; Desvignes, Thomas; Lauridsen, Henrik", "repository": "USAP-DC", "science_program": null, "title": "microMRI analyses of Trematomus scotti Tsco_18_08 with X-cell xenomas", "url": "https://www.usap-dc.org/view/dataset/601538"}, {"dataset_uid": "200262", "doi": "", "keywords": null, "people": null, "repository": "MorphoSource", "science_program": null, "title": "Trematomus scotti with X-cell xenomas", "url": "https://www.morphosource.org/projects/000405843?locale=en"}, {"dataset_uid": "601495", "doi": "10.15784/601495", "keywords": "Antarctica; Antarctic Peninsula; Cryosphere", "people": "Desvignes, Thomas", "repository": "USAP-DC", "science_program": null, "title": "Temperature profiles at five fishing locations on the West Antarctic Peninsula during austral fall 2018.", "url": "https://www.usap-dc.org/view/dataset/601495"}, {"dataset_uid": "601539", "doi": "10.15784/601539", "keywords": "Alveolata; Antarctica; Antarctic Peninsula; Cryosphere; Notoxcellia coronata; Notoxcellia picta; Perkinsozoa; Xcellidae", "people": "Desvignes, Thomas; Postlethwait, John", "repository": "USAP-DC", "science_program": null, "title": "In situ hybridization of X-cell and host fish 18S SSU rRNA in alternate sections of tumor xenomas.", "url": "https://www.usap-dc.org/view/dataset/601539"}, {"dataset_uid": "200383", "doi": "", "keywords": null, "people": null, "repository": "ZooBank", "science_program": null, "title": "Nomenclatural Act for the species Notoxcellia coronata", "url": "https://zoobank.org/NomenclaturalActs/194d91b2-e268-4238-89e2-385819f2c35b"}, {"dataset_uid": "200382", "doi": "", "keywords": null, "people": null, "repository": "ZooBank", "science_program": null, "title": "Nomenclatural Act for the genus Notoxcellia", "url": "https://zoobank.org/NomenclaturalActs/5cf9609e-0111-4386-8518-bd50b5bdde0e"}, {"dataset_uid": "200277", "doi": "", "keywords": null, "people": null, "repository": "NCBI SRA", "science_program": null, "title": "Raw Illumina sequencing reads from skin tumors and visually healthy skins from Trematomus scotti and Nototheniops larseni", "url": "https://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA789574"}], "date_created": "Thu, 01 Jul 2021 00:00:00 GMT", "description": "Overview:\r\nAntarctic biota face increasing stressors from warming oceans. A key question is: What will be the effect of warming waters on Antarctic biota? A gap in our knowledge is the identify of early harbingers of new stressors. In our recent field season, we unexpectedly discovered pink, wart-like neoplasms in Antarctic notothenioid fish, including Trematomus scotti (crowned notothen) and Nototheniops larseni (painted notothen). Neoplasms affected about 30% of T. scotti collected in Andvord Bay on the West Antarctic Peninsula and covered 10 to 30% of the bodies of affected individuals, usually in one contiguous patch. We collected samples from affected and apparently unaffected controls. We could not find evidence of any similar outbreak. Our overall goal is to learn the biological origins of this neoplasm and how it affects cellular function and organismal physiology. \r\nIntellectual Merit:\r\nAim 1: Pathogenic agents. Aim 1a: To test the hypothesis that a virus causes the neoplasm. Methods involve isolating and sequencing viral nucleic acids from neoplasms and from unaffected skin and comparing sequences to known viruses. Aim 1b: To test the hypothesis that neoplasms are hosts to parasites not present in healthy skin. Methods include tissue sections and DNA sequencing to find evidence of parasitic organisms. Significance: achieving Aim 1 will narrow down possible etiological agents. An untested possibility is that environmental contaminants cause the condition; exploring that hypothesis would require further sampling outside the limits of an EAGER proposal.\r\nAim 2: Cell-level pathology. Aim 2a: To test the hypothesis that the histopathology of the neoplasms is similar to other known skin neoplasias; alternatively, it might be a previously unknown type of neoplasia. Methods involve the examination of histological sections to identify pathology-specific characters. Aim 2b: To find effects of neoplasms on cell function. Methods involve performing whole-genome transcriptomics of affected and normal skin by RNA-seq and aligning reads to a T. scotti reference genome. Significance: achieving Aim 2 will define the cell biology and gene-expression phenotypes of the neoplasia, thus suggesting mechanisms that cause it.\r\n[Note: NSF deleted funds specifically to achieve the Aim 3, which nevertheless appears here to represent the original proposal.] Aim 3: Organismal pathology. Aim 3a: To test the hypothesis that the neoplasm has adverse effects on growth and physiology. Methods are to perform morphometrics in fish with neoplasms compared to age-matched controls from otolith studies. Aim 3b: To test the hypothesis that the neoplasia affects reproductive traits. Methods compare reproductive effort in affected and unaffected individuals. Significance: if the neoplasia has little consequences on growth and reproduction, our worry about its spread will be lessened, but if it is harmful, then Antarctic ecology, which largely depends on notothenioid fish, might be in danger.\r\nAchieving Aims 1-3 will advance knowledge by identifying the causes of a neoplasia outbreak in Antarctic fish. Work is potentially transformative because it might represent an early sign of Antarctic fish responses to the stress of global climate change. Proposed work would be the first to investigate a neoplasia outbreak in Antarctic fish. We will assess the project\u2019s success by whether we identify a causative agent and its effects on physiology.\r\nBroader Impacts:\r\nAim 4: Publicizing the neoplasia. We aim to raise awareness of the outbreak and publicize its distinct diagnostic features, including assays to detect it, by contributing to groups that track Antarctic ecosystems. \r\nAim 5: Inclusion. We will involve underrepresented groups in scientific research with authentic research experiences.\r\nAchieving Aims 4 and 5 will benefit society because they will disseminate to scientific and lay communities a potential early-warning system for the effects of an apparently new neoplasia affecting, at least locally, a large proportion of a fish population. Dissemination will stir research to determine whether this neoplasia outbreak is an isolated event or is becoming a general phenomenon, and thus a concern for Antarctic ecosystems. Proposed research will enhance research infrastructure by providing tools to identify the neoplasia. Finally, the project will broaden access to research careers by exposing underserved high school students and undergraduates to an exciting live research project.\r\n", "east": -62.3, "geometry": "POINT(-63.8 -64.15)", "instruments": null, "is_usap_dc": true, "keywords": "FIELD SURVEYS; Andvord Bay; PROTISTS; BENTHIC; FISH; Dallmann Bay; USAP-DC; NSF/USA; AMD/US; AMD", "locations": "Andvord Bay; Dallmann Bay", "north": -63.3, "nsf_funding_programs": "Antarctic Organisms and Ecosystems", "paleo_time": null, "persons": "Postlethwait, John; Varsani, Arvind; Desvignes, Thomas", "platforms": "LAND-BASED PLATFORMS \u003e FIELD SITES \u003e FIELD SURVEYS", "repo": "USAP-DC", "repositories": "GenBank; MorphoSource; NCBI SRA; USAP-DC; ZooBank", "science_programs": null, "south": -65.0, "title": "EAGER: Origin and Physiological Consequences of a Neoplasm Outbreak in Antarctic Fish ", "uid": "p0010221", "west": -65.3}, {"awards": "2022920 Zhan, Zhongwen", "bounds_geometry": "POINT(180 -90)", "dataset_titles": null, "datasets": null, "date_created": "Wed, 30 Jun 2021 00:00:00 GMT", "description": "This EAGER award will explore the Distributed Acoustic Sensing emerging technology that transforms a single optical fiber into a massively multichannel seismic array. This technology may provide a scalable and affordable way to deploy dense seismic networks. Experimental Distributed Acoustic Sensing equipment will be tested in the Antarctic exploiting unused (dark) strands in the existing fiber-optic cable that connects the U.S. Amundsen-Scott South Pole Station to the Remote Earth Science and Seismological Observatory (SPRESSO) located about 7.5-km from the main station. Upon processing the seismic signals, the Distributed Acoustic Sensing may provide a new tool to structurally image firn, glacial ice, and glacial bedrock. Learning how Distributed Acoustic Sensing would work on the ice sheet, scientists can then check seismological signals propagating through the Earth\u0027s crust and mantle variously using natural icequakes and earthquakes events in the surrounding area.\r\n\r\nThe investigators propose to convert at least 8 km of pre-existing fiber optic cable at the Amundsen-Scott South Pole station into more than 8000 sensors to explore the potential of Distributed acoustic sensing (DAS) as a breakthrough data engine for polar seismology. The DAS array will operate for about one year, allowing them to (1) evaluate and calibrate the performance of the DAS technology in the extreme cold, very low noise (including during the exceptionally quiet austral winter) polar plateau environment; (2) record and analyze local ambient and transient signals from ice, anthropogenic signals, ocean microseism, atmospheric and other processes, as well as to study local, regional, and teleseismic tectonic events; (3) structurally image the firn, glacial ice, glacial bed, crust, and mantle, variously using active sources, ambient seismic noise, and natural icequake and earthquake events.", "east": 180.0, "geometry": "POINT(180 -90)", "instruments": null, "is_usap_dc": true, "keywords": "AMD; South Pole Station; GLACIERS/ICE SHEETS; NSF/USA; SEISMIC SURFACE WAVES; AMD/US; SEISMOLOGICAL STATIONS; USAP-DC", "locations": "South Pole Station", "north": -90.0, "nsf_funding_programs": "Antarctic Instrumentation and Facilities", "paleo_time": null, "persons": "Zhan, Zhongwen", "platforms": "LAND-BASED PLATFORMS \u003e PERMANENT LAND SITES \u003e SEISMOLOGICAL STATIONS", "repositories": null, "science_programs": null, "south": -90.0, "title": "EAGER: Pilot Fiber Seismic Networks at the Amundsen-Scott South Pole Station", "uid": "p0010214", "west": 180.0}, {"awards": "1753101 Bernard, Kim", "bounds_geometry": "POLYGON((-65 -64,-64.7 -64,-64.4 -64,-64.1 -64,-63.8 -64,-63.5 -64,-63.2 -64,-62.9 -64,-62.6 -64,-62.3 -64,-62 -64,-62 -64.1,-62 -64.2,-62 -64.3,-62 -64.4,-62 -64.5,-62 -64.6,-62 -64.7,-62 -64.8,-62 -64.9,-62 -65,-62.3 -65,-62.6 -65,-62.9 -65,-63.2 -65,-63.5 -65,-63.8 -65,-64.1 -65,-64.4 -65,-64.7 -65,-65 -65,-65 -64.9,-65 -64.8,-65 -64.7,-65 -64.6,-65 -64.5,-65 -64.4,-65 -64.3,-65 -64.2,-65 -64.1,-65 -64))", "dataset_titles": "2019 Krill Carbon Content; 2019 Krill Morphometrics; CAREER: \"The Omnivores Dilemma\": The Effect of Autumn Diet on Winter Physiology and Condition of Juvenile Antarctic Krill; Expedition of NBP2205; Feeding Experiment - Krill Lipid Classes; Gerlache Strait Krill Demographics", "datasets": [{"dataset_uid": "601707", "doi": "10.15784/601707", "keywords": "Antarctica; Antarctic Krill; Cryosphere; Palmer Station; Winter", "people": "Bernard, Kim", "repository": "USAP-DC", "science_program": null, "title": "Feeding Experiment - Krill Lipid Classes", "url": "https://www.usap-dc.org/view/dataset/601707"}, {"dataset_uid": "601709", "doi": "10.15784/601709", "keywords": "Antarctica; Antarctic Krill; Cryosphere; Palmer Station; Winter", "people": "Bernard, Kim", "repository": "USAP-DC", "science_program": null, "title": "2019 Krill Carbon Content", "url": "https://www.usap-dc.org/view/dataset/601709"}, {"dataset_uid": "601706", "doi": "10.15784/601706", "keywords": "Abundance; Antarctica; Antarctic Krill; Cryosphere", "people": "Bernard, Kim", "repository": "USAP-DC", "science_program": null, "title": "Gerlache Strait Krill Demographics", "url": "https://www.usap-dc.org/view/dataset/601706"}, {"dataset_uid": "200368", "doi": "", "keywords": null, "people": null, "repository": "BCO-DMO", "science_program": null, "title": "CAREER: \"The Omnivores Dilemma\": The Effect of Autumn Diet on Winter Physiology and Condition of Juvenile Antarctic Krill", "url": "https://www.bco-dmo.org/project/824760"}, {"dataset_uid": "200369", "doi": "10.7284/909918", "keywords": null, "people": null, "repository": "R2R", "science_program": null, "title": "Expedition of NBP2205", "url": "https://www.rvdata.us/search/cruise/NBP2205"}, {"dataset_uid": "601708", "doi": "10.15784/601708", "keywords": "Antarctica; Antarctic Krill; Cryosphere; Palmer Station; Winter", "people": "Bernard, Kim", "repository": "USAP-DC", "science_program": null, "title": "2019 Krill Morphometrics", "url": "https://www.usap-dc.org/view/dataset/601708"}], "date_created": "Mon, 31 Aug 2020 00:00:00 GMT", "description": "Antarctic krill are essential in the Southern Ocean as they support vast numbers of marine mammals, seabirds and fishes, some of which feed almost exclusively on krill. Antarctic krill also constitute a target species for industrial fisheries in the Southern Ocean. The success of Antarctic krill populations is largely determined by the ability of their young to survive the long, dark winter, where food is extremely scarce. To survive the long-dark winter, young Antarctic krill must have a high-quality diet in autumn. However, warming in certain parts of Antarctica is changing the dynamics and quality of the polar food web, resulting in a shift in the type of food available to young krill in autumn. It is not yet clear how these dynamic changes are affecting the ability of krill to survive the winter. This project aims to fill an important gap in current knowledge on an understudied stage of the Antarctic krill life cycle, the 1-year old juveniles. The results derived from this work will contribute to the development of improved bioenergetic, population and ecosystem models, and will advance current scientific understanding of this critical Antarctic species. This CAREER projects core education and outreach objectives seek to enhance education and increase diversity within STEM fields. An undergraduate course will be developed that will integrate undergraduate research and writing in way that promotes authentic scientific inquiry and analysis of original research data by the students, and that enhances their communication skills. A graduate course will be developed that will promote students skills in communicating their own research to a non-scientific audience. Graduate students will be supported through the proposed study and will gain valuable research experience. Traditionally underserved undergraduate students will be recruited to conduct independent research under the umbrella of the larger project. Throughout each field season, the research team will maintain a weekly blog that will include short videos, photographs and text highlighting the research, as well as their experiences living and working in Antarctica. The aim of the blog will be to engage the public and increase awareness and understanding of Antarctic ecosystems and the impact of warming, and of the scientific process of research and discovery.\u003cbr/\u003e\u003cbr/\u003eIn this 5-year CAREER project, the investigator will use a combination of empirical and theoretical techniques to assess the effects of diet on 1-year old krill in autumn-winter. The research is centered on four hypotheses: (H1) autumn diet affects 1-year old krill physiology and condition at the onset of winter; (H2) autumn diet has an effect on winter physiology and condition of 1-year old krill under variable winter food conditions; (H3) the rate of change in physiology and condition of 1-year old krill from autumn to winter is dependent on autumn diet; and (H4) the winter energy budget of 1-year old krill will vary between years and will be dependent on autumn diet. Long-term feeding experiments and in situ sampling will be used to measure changes in the physiology and condition of krill in relation to their diet and feeding environment. Empirically-derived data will be used to develop theoretical models of growth rates and energy budgets to determine how diet will influence the overwinter survival of 1-year old krill. The research will be integrated with an education and outreach plan to (1) develop engaging undergraduate and graduate courses, (2) train and develop young scientists for careers in polar research, and (3) engage the public and increase their awareness and understanding.\u003cbr/\u003e\u003cbr/\u003eThis award reflects NSFs statutory mission and has been deemed worthy of support through evaluation using the Foundation\u0027s intellectual merit and broader impacts review criteria.", "east": -62.0, "geometry": "POINT(-63.5 -64.5)", "instruments": null, "is_usap_dc": true, "keywords": "Antarctic Peninsula; AMD; FIELD INVESTIGATION; ANIMALS/INVERTEBRATES; AMD/US; PELAGIC; Anvers Island; USAP-DC; NSF/USA", "locations": "Antarctic Peninsula; Anvers Island", "north": -64.0, "nsf_funding_programs": "Antarctic Organisms and Ecosystems", "paleo_time": null, "persons": "Bernard, Kim", "platforms": "LAND-BASED PLATFORMS \u003e FIELD SITES \u003e FIELD INVESTIGATION", "repo": "USAP-DC", "repositories": "BCO-DMO; R2R; USAP-DC", "science_programs": null, "south": -65.0, "title": "CAREER: \"The Omnivore\u0027s Dilemma\": The Effect of Autumn Diet on Winter Physiology and Condition of Juvenile Antarctic Krill", "uid": "p0010124", "west": -65.0}, {"awards": "1341464 Robinson, Rebecca; 1341432 Brzezinski, Mark", "bounds_geometry": "POLYGON((-175 -54,-174 -54,-173 -54,-172 -54,-171 -54,-170 -54,-169 -54,-168 -54,-167 -54,-166 -54,-165 -54,-165 -55.3,-165 -56.6,-165 -57.9,-165 -59.2,-165 -60.5,-165 -61.8,-165 -63.1,-165 -64.4,-165 -65.7,-165 -67,-166 -67,-167 -67,-168 -67,-169 -67,-170 -67,-171 -67,-172 -67,-173 -67,-174 -67,-175 -67,-175 -65.7,-175 -64.4,-175 -63.1,-175 -61.8,-175 -60.5,-175 -59.2,-175 -57.9,-175 -56.6,-175 -55.3,-175 -54))", "dataset_titles": "Diatom assemblage counts from NBP17-02 shipboard carboy experiments; Dissolved nutrient profiles from along 170\u00b0W between 67 and 54\u00b0S; Expedition Data of NBP1702; Particle composition measurements from along 170\u00b0W between 67-54\u00b0S; Particulate silicon and nitrogen concentrations and isotopic composition measurements in McLane pump profiles from 67\u00b0S to 55\u00b0S latitude in the Pacific Sector of the Southern Ocean; Silicon concentration and isotopic composition measurements in pore waters and sediments from 67\u00b0S to 55\u00b0S latitude in the Pacific Sector of the Southern Ocean; Surface Southern Ocean community growouts to evaluate the diatom bound N isotope proxy", "datasets": [{"dataset_uid": "601269", "doi": "10.15784/601269", "keywords": "Antarctica; Chlorophyll; Cryosphere; Southern Ocean", "people": "Brzezinski, Mark; Robinson, Rebecca", "repository": "USAP-DC", "science_program": null, "title": "Dissolved nutrient profiles from along 170\u00b0W between 67 and 54\u00b0S", "url": "https://www.usap-dc.org/view/dataset/601269"}, {"dataset_uid": "601576", "doi": "10.15784/601576", "keywords": "Antarctica; Biogenic Silica; Chemistry:Sediment; Cryosphere; Diatom; Diatom Bound; Lithogenic Silica; Marine Geoscience; NBP1702; Nitrogen Isotopes; Nitrogen Stable Isotope; Silicon Cycle; Silicon Stable Isotope; Southern Ocean", "people": "Closset, Ivia; Jones, Janice L.; Robinson, Rebecca; Brzezinski, Mark", "repository": "USAP-DC", "science_program": null, "title": " Particulate silicon and nitrogen concentrations and isotopic composition measurements in McLane pump profiles from 67\u00b0S to 55\u00b0S latitude in the Pacific Sector of the Southern Ocean", "url": "https://www.usap-dc.org/view/dataset/601576"}, {"dataset_uid": "601522", "doi": "10.15784/601522", "keywords": "Antarctica; Cryosphere; Nitrogen Isotopes; Oceans; Paleoproxies; Southern Ocean", "people": "Closset, Ivia; Brzezinski, Mark; Robinson, Rebecca ; Robinson, Rebecca; Riesselman, Christina; Jones, Colin; Kelly, Roger", "repository": "USAP-DC", "science_program": null, "title": "Surface Southern Ocean community growouts to evaluate the diatom bound N isotope proxy", "url": "https://www.usap-dc.org/view/dataset/601522"}, {"dataset_uid": "601523", "doi": "10.15784/601523", "keywords": "Antarctica; Biology; Carboy Growouts; Cryosphere; Diatom; Diatom Assemblage Data; NBP1702; Oceans; R/V Nathaniel B. Palmer; Southern Ocean; Southern Ocean Summer", "people": "Robinson, Rebecca ; Riesselman, Christina; Robinson, Rebecca; Jones, Colin", "repository": "USAP-DC", "science_program": null, "title": "Diatom assemblage counts from NBP17-02 shipboard carboy experiments", "url": "https://www.usap-dc.org/view/dataset/601523"}, {"dataset_uid": "200126", "doi": "10.7284/907211", "keywords": null, "people": null, "repository": "R2R", "science_program": null, "title": "Expedition Data of NBP1702", "url": "https://www.rvdata.us/search/cruise/NBP1702"}, {"dataset_uid": "601276", "doi": "10.15784/601276", "keywords": "Antarctica; Biogenic Silica; Cryosphere; Nitrogen Isotopes; Southern Ocean", "people": "Robinson, Rebecca; Brzezinski, Mark", "repository": "USAP-DC", "science_program": null, "title": "Particle composition measurements from along 170\u00b0W between 67-54\u00b0S", "url": "https://www.usap-dc.org/view/dataset/601276"}, {"dataset_uid": "601562", "doi": "10.15784/601562", "keywords": "Antarctica; Biogenic Silica; Chemistry:Sediment; Cryosphere; Lithogenic Silica; Marine Geoscience; NBP1702; Pore Water Biogeochemistry; Sediments; Silicon Cycle; Silicon Stable Isotope; Southern Ocean", "people": "Jones, Janice L.; Closset, Ivia; Brzezinski, Mark", "repository": "USAP-DC", "science_program": null, "title": "Silicon concentration and isotopic composition measurements in pore waters and sediments from 67\u00b0S to 55\u00b0S latitude in the Pacific Sector of the Southern Ocean", "url": "https://www.usap-dc.org/view/dataset/601562"}], "date_created": "Wed, 26 Feb 2020 00:00:00 GMT", "description": "The rise in atmospheric carbon dioxide concentrations and associated climate changes make understanding the role of the ocean in large scale carbon cycle a priority. Geologic samples allow exploration of potential mechanisms for carbon dioxide drawdown during glacial periods through the use of geochemical proxies. Nitrogen and silicon isotope signatures from fossil diatoms (microscopic plants) are used to investigate changes in the physical supply and biological demand for nutrients (like nitrogen and silicon and carbon) in the Southern Ocean. The project will evaluate the use the nitrogen and silicon isotope proxies through a series of laboratory experiments and Southern Ocean field sampling. The results will provide quantification of real relationships between nitrogen and silicon isotopes and nutrient usage in the Southern Ocean and allow exploration of the role of other factors, including biological diversity, ice cover, and mixing, in altering the chemical signatures recorded by diatoms. Seafloor sediment samples will be used to evaluate how well the signal created in the water column is recorded by fossil diatoms buried in the seafloor. Improving the nutrient isotope proxies will allow for a more quantitative understanding of the role of polar biology in regulating natural variation in atmospheric carbon dioxide. The project will also result in the training of a graduate student and development of outreach materials targeting a broad popular audience.\r\n\r\nThis project seeks to test the fidelity of the diatom nitrogen and silicon isotope proxies, two commonly used paleoceanographic tools for investigating the role of the Southern Ocean biological pump in regulating atmospheric CO2 concentrations on glacial-interglacial timescales. Existing ground-truthing data, including culture experiments, surface sediment data and downcore reconstructions, all suggest that nutrient utilization is the primary driver of isotopic variation in the Southern Ocean. However, strong contribution of interspecific variation is implied by recent culture results. Moreover, field and laboratory studies present some contradictory results in terms of the relative importance of interspecific variation and of inferred post-depositional alteration of the nutrient isotope signals. Here, a first order test of the N and Si diatom nutrient isotope paleo-proxies, involving water column dissolved and particulate sampling and laboratory culturing of field-isolates, is proposed. Southern Ocean water, biomass, live diatoms and fossil diatom sampling will be conducted to investigate species and assemblage related variability in diatom nitrogen and silicon isotopes and their relationship to surface nutrient fields and early diagenesis. Access to fresh materials produced in an analogous environmental context to the sediments of primary interest is critical for making robust paleoceanographic reconstructions. Field sampling will occur along 175\u00b0W, transecting the Antarctic Circumpolar Current from the subtropics to the marginal ice edge. Collection of water, sinking/suspended particles and multi-core samples from 13 stations and 3 shipboard incubation experiments will be used to test four proposed hypotheses that together evaluate the significance of existing culture results and seek to allow the best use of diatom nutrient isotope proxies in evaluating the biological pump.", "east": -165.0, "geometry": "POINT(-170 -60.5)", "instruments": null, "is_usap_dc": true, "keywords": "Southern Ocean; AMD; NITROGEN ISOTOPES; R/V NBP; AMD/US; NSF/USA; NUTRIENTS; USAP-DC", "locations": "Southern Ocean", "north": -54.0, "nsf_funding_programs": "Antarctic Earth Sciences; Antarctic Earth Sciences", "paleo_time": null, "persons": "Robinson, Rebecca; Brzezinski, Mark", "platforms": "WATER-BASED PLATFORMS \u003e VESSELS \u003e SURFACE \u003e R/V NBP", "repo": "USAP-DC", "repositories": "R2R; USAP-DC", "science_programs": null, "south": -67.0, "title": "Collaborative Proposal: A Field and Laboratory Examination of the Diatom N and Si Isotope Proxies: Implications for Assessing the Southern Ocean Biological Pump", "uid": "p0010083", "west": -175.0}, {"awards": "1745036 Marchetti, Adrian; 1744760 Hopkinson, Brian", "bounds_geometry": "POLYGON((-77 -61,-75.2 -61,-73.4 -61,-71.6 -61,-69.8 -61,-68 -61,-66.2 -61,-64.4 -61,-62.6 -61,-60.8 -61,-59 -61,-59 -62.1,-59 -63.2,-59 -64.3,-59 -65.4,-59 -66.5,-59 -67.6,-59 -68.7,-59 -69.8,-59 -70.9,-59 -72,-60.8 -72,-62.6 -72,-64.4 -72,-66.2 -72,-68 -72,-69.8 -72,-71.6 -72,-73.4 -72,-75.2 -72,-77 -72,-77 -70.9,-77 -69.8,-77 -68.7,-77 -67.6,-77 -66.5,-77 -65.4,-77 -64.3,-77 -63.2,-77 -62.1,-77 -61))", "dataset_titles": "Photosynthetic physiological data of Proteorhodopsin containing diatoms under differing iron availabilities", "datasets": [{"dataset_uid": "601530", "doi": "10.15784/601530", "keywords": "Antarctica; Cryosphere; Diatom", "people": "Marchetti, Adrian; Hopkinson, Brian; Plumb, Kaylie; Andrew, Sarah", "repository": "USAP-DC", "science_program": null, "title": "Photosynthetic physiological data of Proteorhodopsin containing diatoms under differing iron availabilities", "url": "https://www.usap-dc.org/view/dataset/601530"}], "date_created": "Sun, 16 Jun 2019 00:00:00 GMT", "description": "Proteorhodopsins (PR) are retinal-binding membrane proteins that can act as light-driven proton pumps to generate energy that can be used for metabolism and growth. The discovery of PRs in many diverse marine prokaryotic microbes has initiated extensive investigations into their distributions and functional roles. Recently, a rhodopsin-like gene of the proton-pumping variety was identified in diatoms thus revealing their presence within obligate marine eukaryotic photoautotrophs. Since this time, PRs have been identified in a number of diatom isolates although there appears to be a much higher frequency of\r\nPR in diatoms residing in cold, iron-limited regions of the ocean, particularly in the Southern Ocean (SO). PR is especially suited for use in SO phytoplankton since unlike conventional photosynthesis, it uses no iron and its reaction rate is insensitive to temperature. The overall objective of our proposed project is to characterize Antarctic diatom-PR and determine its role in the adaptation of SO diatoms to the prevailing conditions of low iron concentrations and extremely low temperatures. Our research objectives will be achieved through a combination of molecular, biochemical and physiological measurements in diatom isolates recently obtained from the Western Antarctic Peninsula region. We will determine the proton-pumping characteristics and pumping rates of PR as a function of light intensity and wavelength, the resultant PR-linked intracellular ATP production rates, and the cellular localization of the protein. We will examine under which environmental conditions Antarctic diatom-PR is most highly expressed and construct a cellular energy budget that includes diatom-PR when grown under these different growth conditions. Estimates of the energy flux generated by PR in PR-containing diatoms will be compared to total energy generation by the photosynthetic light reactions and metabolically coupled respiration rates. Finally, we will compare the characteristics and gene expression of diatom-PR in Antarctic diatoms to PR-containing diatoms isolated from temperate regions in order to investigate if there is a preferential dependence on energy production through diatom-PR in diatoms residing in cold, iron-limited regions of the ocean.", "east": -59.0, "geometry": "POINT(-68 -66.5)", "instruments": null, "is_usap_dc": true, "keywords": "FIELD INVESTIGATION; NSF/USA; Southern Ocean; AMD; LABORATORY; AMD/US; USAP-DC; BIOGEOCHEMICAL CYCLES", "locations": "Southern Ocean", "north": -61.0, "nsf_funding_programs": "Antarctic Organisms and Ecosystems; Antarctic Organisms and Ecosystems", "paleo_time": null, "persons": "Marchetti, Adrian; Septer, Alecia; Hopkinson, Brian", "platforms": "OTHER \u003e PHYSICAL MODELS \u003e LABORATORY; LAND-BASED PLATFORMS \u003e FIELD SITES \u003e FIELD INVESTIGATION", "repo": "USAP-DC", "repositories": "USAP-DC", "science_programs": null, "south": -72.0, "title": "Collaborative research: Antarctic diatom proteorhodopsins: Characterization and a potential role in the iron-limitation response", "uid": "p0010033", "west": -77.0}, {"awards": "0440775 Jacobs, Stanley", "bounds_geometry": null, "dataset_titles": "Expedition data of NBP0702; NBP0702 surface sediment sample information and images", "datasets": [{"dataset_uid": "002645", "doi": null, "keywords": null, "people": null, "repository": "R2R", "science_program": null, "title": "Expedition data of NBP0702", "url": "https://www.rvdata.us/search/cruise/NBP0702"}, {"dataset_uid": "601473", "doi": "10.15784/601473", "keywords": "Amundsen Sea; Antarctica; Cryosphere; Marine Geoscience; Marine Sediments; NBP0702; Photographs; R/V Nathaniel B. Palmer; Seafloor Sampling; Sediment Description; Smith-McIntyre Grab", "people": "Jacobs, Stanley; Leventer, Amy", "repository": "USAP-DC", "science_program": null, "title": "NBP0702 surface sediment sample information and images", "url": "https://www.usap-dc.org/view/dataset/601473"}], "date_created": "Tue, 04 May 2010 00:00:00 GMT", "description": "This collaborative study between Columbia University and the Southampton Oceanography Centre will investigate the dynamics of warm water intrusions under antarctic floating ice shelves. The study will focus on the Amundsen Sea and Pine Island Glacier, and will document how this water gains access to the continental shelf, transports heat into the ice shelf cavities via deep, glacially-scoured troughs, and rises beneath the ice to drive basal melting. The resulting seawater-meltwater mixtures upwell near the ice fronts, contributing to the formation of atypical coastal polynyas with strong geochemical signatures. Multidecadal freshening downstream is consistent with thinning ice shelves, which may be triggering changes inland, increasing the flow of grounded ice into the sea. This work will be carried out in combination with parallel modeling, remote sensing and data based projects, in an effort to narrow uncertainties about the response of West Antarctic Ice Sheet to climate change. Using state-of-the-art facilities and instruments, this work will enhance knowledge of water mass production and modification, and the understanding of interactions between the ocean circulation, sea floor and ice shelves. The data and findings will be reported to publicly accessible archives and submitted for publication in the scientific literature. The information obtained should prove invaluable for the development and validation of general circulation models, needed to predict the future role of the Antarctic Ice Sheet in sea level change.", "east": null, "geometry": null, "instruments": "IN SITU/LABORATORY INSTRUMENTS \u003e PROFILERS/SOUNDERS \u003e CTD; IN SITU/LABORATORY INSTRUMENTS \u003e MAGNETIC/MOTION SENSORS \u003e GRAVIMETERS \u003e GRAVIMETERS; IN SITU/LABORATORY INSTRUMENTS \u003e PRESSURE/HEIGHT METERS \u003e PRESSURE SENSORS; IN SITU/LABORATORY INSTRUMENTS \u003e PHOTON/OPTICAL DETECTORS \u003e TURBIDITY METERS; EARTH REMOTE SENSING INSTRUMENTS \u003e PASSIVE REMOTE SENSING \u003e POSITIONING/NAVIGATION \u003e GPS \u003e GPS; IN SITU/LABORATORY INSTRUMENTS \u003e PROFILERS/SOUNDERS \u003e ACOUSTIC SOUNDERS \u003e ADCP; IN SITU/LABORATORY INSTRUMENTS \u003e PROFILERS/SOUNDERS \u003e ACOUSTIC SOUNDERS \u003e MSBS", "is_usap_dc": false, "keywords": "AMD; R/V NBP; NSF/USA; Amundsen Sea; AMD/US; USAP-DC", "locations": "Amundsen Sea", "north": null, "nsf_funding_programs": "Antarctic Ocean and Atmospheric Sciences", "paleo_time": null, "persons": "Jacobs, Stanley", "platforms": "WATER-BASED PLATFORMS \u003e VESSELS \u003e SURFACE \u003e R/V NBP", "repo": "R2R", "repositories": "R2R; USAP-DC", "science_programs": null, "south": null, "title": "The Amundsen Continental Shelf and the Antarctic Ice Sheet", "uid": "p0000836", "west": null}]

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