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Older retrieved projects from AMD. Warning: many have incomplete information.
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Project Title/Abstract/Map NSF Award(s) Date Created PIs / Scientists Dataset Links and Repositories
Evolution of hemoglobin genes in notothenioid fishes

2232891
1543383
1947040
2023-05-03 Desvignes, Thomas; Postlethwait, John
Rates of hemoglobin evolution among genes and across notothenioid species.
USAP-DC
Phylogenetic trees of hemoglobin proteins in notothenioids.
USAP-DC
Notothenioid species tree used in the study.
USAP-DC
Notothenioid hemoglobin protein 3D modeling.
USAP-DC
RELAX tests for pervasive changes in strength of natural selection on hemoglobin genes in notothenioids.
USAP-DC
MEME tests of sites evolving under episodic diversifying selection in notothenioid hemoglobin genes.
USAP-DC
aBSREL tests for episodic diversifying selection on hemoglobin genes in notothenioids.
USAP-DC
EAGER: Origin and Physiological Consequences of a Neoplasm Outbreak in Antarctic Fish

1947040
2021-07-01 Postlethwait, John; Varsani, Arvind; Desvignes, Thomas
Histopathology of X-cell xenomas in Trematomus scotti and Nototheniops larseni.
USAP-DC
18 SSU rDNA type sequences for Notoxcellia coronata (nov. sp.)
GenBank
Expedition Data of LMG1805
R2R
Morphological and pathological data of Trematomus scotti specimens captured on May 30th, 2018 in Andvord Bay.
USAP-DC
Temperature profiles at five fishing locations on the West Antarctic Peninsula during austral fall 2018.
USAP-DC
Fish pictures and skin pathology of X-cell infection in Trematomus scotti.
USAP-DC
Phylogenetic Analysis of Notoxcellia species.
USAP-DC
In situ hybridization of X-cell and host fish 18S SSU rRNA in alternate sections of tumor xenomas.
USAP-DC
Nomenclatural Act for the genus Notoxcellia
ZooBank
18 SSU rDNA type sequences for Notoxcellia picta (nov. sp.)
GenBank
Nomenclatural Act for the species Notoxcellia coronata
ZooBank
Nomenclatural Act for the species Notoxcellia picta
ZooBank
Similarity matrices of Notoxcellia spp.
USAP-DC
Trematomus scotti mt-co1 sequence alignment.
USAP-DC
Raw Illumina sequencing reads from skin tumors and visually healthy skins from Trematomus scotti and Nototheniops larseni
NCBI SRA
Morphological, fecundity, and age data of Trematomus scotti from Andvord Bay and the Weddell Sea.
USAP-DC
Gonad and skin histology of Trematomus loennbergii infected by Notoxcellia sp.
USAP-DC
microMRI analyses of Trematomus scotti Tsco_18_08 with X-cell xenomas
USAP-DC
Phylogenetic Analysis of Notoxcellia species, including novel Ross Sea specimen
USAP-DC
Expedition Data of LMG1805
R2R
Metagenomic analysis of apparently healthy and tumor samples using Kaiju software
USAP-DC
Trematomus scotti with X-cell xenomas
MorphoSource
Evolution of Oxygenic Photosynthesis as Preserved in Melainabacterial Genomes from Lake Vanda, Antarctica

1745341
2020-06-22 Sumner, Dawn; Eisen, Jonathan; Tazi, Loubna
JAAXLU000000000, JAAXLT000000000
NCBI GenBank
GP0191362, Gp0191371
IMG Gold
Collaborative Research: Biogeochemistry of Cyanobactrial Mats and Hyporheic Zone Microbes in McMurdo Dry Valley Glacial Meltwater Streams

0739648
2013-12-10 Cary, Stephen
Biogeochemistry of Cyanobactrial Mats and Hyporheic Zone Microbes in McMurdo Dry Valley Glacial Meltwater Streams
USAP-DC