USAP-DC

{"dp_type": "Project", "free_text": "Iron Limitation"}

[{"awards": "2207011 Granger, Julie", "bounds_geometry": "POLYGON((-180 -60,-144 -60,-108 -60,-72 -60,-36 -60,0 -60,36 -60,72 -60,108 -60,144 -60,180 -60,180 -63,180 -66,180 -69,180 -72,180 -75,180 -78,180 -81,180 -84,180 -87,180 -90,144 -90,108 -90,72 -90,36 -90,0 -90,-36 -90,-72 -90,-108 -90,-144 -90,-180 -90,-180 -87,-180 -84,-180 -81,-180 -78,-180 -75,-180 -72,-180 -69,-180 -66,-180 -63,-180 -60))", "dataset_titles": null, "datasets": null, "date_created": "Mon, 04 Mar 2024 00:00:00 GMT", "description": "Iron is a limiting nutrient for primary production in 30% of the global ocean, including the Southern Ocean. Dinoflagellates thrive in a wide variety of coastal and oceanic environments, including iron-limited regions. As iron is a biologically essential element for the growth and proliferation of marine algae, dinoflagellates may have evolved strategic mechanisms to combat iron limitation. Presently, these mechanisms have been scantly investigated in dinoflagellates. Here, we compare the growth response of the well-studied diatom Thalasiossira weissflogii to that of dinoflagellates Amphidinium carterae, Heterocapsa triquetra, and Symbiodinium tridacnidorum to different iron conditions: (a) iron-replete medium, (b) iron-limited medium, and (c) iron-limited medium supplemented with the siderophore Deferoxamine B (DFB). Preliminary observations suggest that A. carterae is able to assimilate iron bound to DFB, in contrast to T. weissflogii and Heterocapsa triquetra. A survey of the transcriptome of A. carterae suggests that it possess genes analogous to the TonB-dependent receptors (TBDRs) associated with iron-siderophore transport in prokaryotes. Additional species of dinoflagellates will be observed to investigate the ubiquity of this strategy in dinoflagellates. A more comprehensive understanding of dinoflagellate acclimation to low iron conditions is key to understanding their ecophysiology and the biogeochemical dynamics of iron-limited regions.", "east": 180.0, "geometry": "POINT(0 -89.999)", "instruments": null, "is_usap_dc": true, "keywords": "Dinoflagellates; Iron; United States Of America; Iron Acquisition; Siderophore; TRACE ELEMENTS; Iron Limitation", "locations": "United States Of America", "north": -60.0, "nsf_funding_programs": "Antarctic Organisms and Ecosystems", "paleo_time": null, "persons": "Granger, Julie; Lin, Senjie", "platforms": null, "repositories": null, "science_programs": null, "south": -90.0, "title": "Siderophore utilization by dinoflagellates as a strategy for iron acquisition", "uid": "p0010455", "west": -180.0}, {"awards": "1643684 Saito, Mak; 1644073 DiTullio, Giacomo", "bounds_geometry": "POLYGON((-180 -72,-173.6 -72,-167.2 -72,-160.8 -72,-154.4 -72,-148 -72,-141.6 -72,-135.2 -72,-128.8 -72,-122.4 -72,-116 -72,-116 -72.7,-116 -73.4,-116 -74.1,-116 -74.8,-116 -75.5,-116 -76.2,-116 -76.9,-116 -77.6,-116 -78.3,-116 -79,-122.4 -79,-128.8 -79,-135.2 -79,-141.6 -79,-148 -79,-154.4 -79,-160.8 -79,-167.2 -79,-173.6 -79,180 -79,178 -79,176 -79,174 -79,172 -79,170 -79,168 -79,166 -79,164 -79,162 -79,160 -79,160 -78.3,160 -77.6,160 -76.9,160 -76.2,160 -75.5,160 -74.8,160 -74.1,160 -73.4,160 -72.7,160 -72,162 -72,164 -72,166 -72,168 -72,170 -72,172 -72,174 -72,176 -72,178 -72,-180 -72))", "dataset_titles": "Algal pigment concentrations from the Ross Sea; Biogenic silica concentrations from the Ross Sea; NBP1801 Expedition data; Nutrients from NBP18-01 CICLOPS", "datasets": [{"dataset_uid": "601225", "doi": "10.15784/601225", "keywords": "Antarctica; Biogenic Silica; Biogenic Silica Concentrations; Chemistry:Water; Geochemistry; NBP1801; Oceans; Ross Sea; R/v Nathaniel B. Palmer; Sea Water; Southern Ocean; Spectroscopy; Water Measurements; Water Samples", "people": "Ditullio, Giacomo; Schanke, Nicole", "repository": "USAP-DC", "science_program": null, "title": "Biogenic silica concentrations from the Ross Sea", "url": "https://www.usap-dc.org/view/dataset/601225"}, {"dataset_uid": "601205", "doi": "10.15784/601205", "keywords": "Antarctica; Chemistry:fluid; Chemistry:Fluid; Chlorophyll; Chromatography; Liquid Chromatograph; Oceans; Ross Sea; R/v Nathaniel B. Palmer; Sea Water; Seawater Measurements; Southern Ocean; Water Measurements; Water Samples", "people": "Ditullio, Giacomo", "repository": "USAP-DC", "science_program": null, "title": "Algal pigment concentrations from the Ross Sea", "url": "https://www.usap-dc.org/view/dataset/601205"}, {"dataset_uid": "601428", "doi": "10.15784/601428", "keywords": "Amundsen Sea; Antarctica; NBP1801; Nitrate; Nitrite; Nutrients; Phosphate; Ross Sea; R/v Nathaniel B. Palmer; Silicic Acid; Terra Nova Bay", "people": "Saito, Mak", "repository": "USAP-DC", "science_program": null, "title": "Nutrients from NBP18-01 CICLOPS", "url": "https://www.usap-dc.org/view/dataset/601428"}, {"dataset_uid": "200056", "doi": "10.7284/907753", "keywords": null, "people": null, "repository": "R2R", "science_program": null, "title": "NBP1801 Expedition data", "url": "https://www.rvdata.us/search/cruise/NBP1801"}], "date_created": "Thu, 08 Aug 2019 00:00:00 GMT", "description": "Phytoplankton blooms in the coastal waters of the Ross Sea, Antarctica are typically dominated by either diatoms or Phaeocystis Antarctica (a flagellated algae that often can form large colonies in a gelatinous matrix). The project seeks to determine if an association of bacterial populations with Phaeocystis antarctica colonies can directly supply Phaeocystis with Vitamin B12, which can be an important co-limiting micronutrient in the Ross Sea. The supply of an essential vitamin coupled with the ability to grow at lower iron concentrations may put Phaeocystis at a competitive advantage over diatoms. Because Phaeocystis cells can fix more carbon than diatoms and Phaeocystis are not grazed as efficiently as diatoms, the project will help in refining understanding of carbon dynamics in the region as well as the basis of the food web webs. Such understanding also has the potential to help refine predictive ecological models for the region. The project will conduct public outreach activities and will contribute to undergraduate and graduate research. Engagement of underrepresented students will occur during summer student internships. A collaboration with Italian Antarctic researchers, who have been studying the Terra Nova Bay ecosystem since the 1980s, aims to enhance the project and promote international scientific collaborations. \u003cbr/\u003e\u003cbr/\u003eThe study will test whether a mutualistic symbioses between attached bacteria and Phaeocystis provides colonial cells a mechanism for alleviating chronic Vitamin B12 co-limitation effects thereby conferring them with a competitive advantage over diatom communities. The use of drifters in a time series study will provide the opportunity to track in both space and time a developing algal bloom in Terra Nova Bay and to determine community structure and the physiological nutrient status of microbial populations. A combination of flow cytometry, proteomics, metatranscriptomics, radioisotopic and stable isotopic labeling experiments will determine carbon and nutrient uptake rates and the role of bacteria in mitigating potential vitamin B12 and iron limitation. Membrane inlet and proton transfer reaction mass spectrometry will also be used to estimate net community production and release of volatile organic carbon compounds that are climatically active. Understanding how environmental parameters can influence microbial community dynamics in Antarctic coastal waters will advance an understanding of how changes in ocean stratification and chemistry could impact the biogeochemistry and food web dynamics of Southern Ocean ecosystems.", "east": 160.0, "geometry": "POINT(-158 -75.5)", "instruments": null, "is_usap_dc": true, "keywords": "BIOGEOCHEMICAL CYCLES; NBP1801; Amd/Us; USA/NSF; USAP-DC; NUTRIENTS; PIGMENTS; CHLOROPHYLL; R/V NBP; Ross Sea; AMD", "locations": "Ross Sea", "north": -72.0, "nsf_funding_programs": "Antarctic Organisms and Ecosystems; Antarctic Organisms and Ecosystems; Antarctic Integrated System Science", "paleo_time": null, "persons": "DiTullio, Giacomo; Lee, Peter", "platforms": "WATER-BASED PLATFORMS \u003e VESSELS \u003e SURFACE \u003e R/V NBP", "repo": "USAP-DC", "repositories": "R2R; USAP-DC", "science_programs": null, "south": -79.0, "title": "Collaborative Research: Cobalamin and Iron Co-Limitation Of Phytoplankton Species in Terra Nova Bay", "uid": "p0010045", "west": -116.0}, {"awards": "0944254 Smith, Walker; 0944165 McGillicuddy, Dennis", "bounds_geometry": "POLYGON((168 -65,168.2 -65,168.4 -65,168.6 -65,168.8 -65,169 -65,169.2 -65,169.4 -65,169.6 -65,169.8 -65,170 -65,170 -65,170 -65,170 -65,170 -65,170 -65,170 -65,170 -65,170 -65,170 -65,170 -65,169.8 -65,169.6 -65,169.4 -65,169.2 -65,169 -65,168.8 -65,168.6 -65,168.4 -65,168.2 -65,168 -65,168 -65,168 -65,168 -65,168 -65,168 -65,168 -65,168 -65,168 -65,168 -65,168 -65))", "dataset_titles": "Data from expdition NBP1201; Expedition Data; Project data: Processes Regulating Iron Supply at the Mesoscale - Ross Sea", "datasets": [{"dataset_uid": "000155", "doi": "", "keywords": null, "people": null, "repository": "BCO-DMO", "science_program": null, "title": "Project data: Processes Regulating Iron Supply at the Mesoscale - Ross Sea", "url": "http://www.bco-dmo.org/project/2155"}, {"dataset_uid": "000156", "doi": "", "keywords": null, "people": null, "repository": "BCO-DMO", "science_program": null, "title": "Data from expdition NBP1201", "url": "http://www.bco-dmo.org/deployment/506350"}, {"dataset_uid": "001442", "doi": "", "keywords": null, "people": null, "repository": "R2R", "science_program": null, "title": "Expedition Data", "url": "https://www.rvdata.us/search/cruise/NBP1201"}], "date_created": "Wed, 08 Jul 2015 00:00:00 GMT", "description": "The Ross Sea continental shelf is one of the most productive areas in the Southern Ocean, and may comprise a significant, but unaccounted for, oceanic CO2 sink, largely driven by phytoplankton production. The processes that control the magnitude of primary production in this region are not well understood, but data suggest that iron limitation is a factor. Field observations and model simulations indicate four potential sources of dissolved iron to surface waters of the Ross Sea: (1) circumpolar deep water intruding from the shelf edge; (2) sediments on shallow banks and nearshore areas; (3) melting sea ice around the perimeter of the polynya; and (4) glacial meltwater from the Ross Ice Shelf. The principal investigators hypothesize that hydrodynamic transport via mesoscale currents, fronts, and eddies facilitate the supply of dissolved iron from these four sources to the surface waters of the Ross Sea polynya. These hypotheses will be tested through a combination of in situ observations and numerical modeling, complemented by satellite remote sensing. In situ observations will be obtained during a month-long cruise in the austral summer. The field data will be incorporated into model simulations, which allow quantification of the relative contributions of the various hypothesized iron supply mechanisms, and assessment of their impact on primary production. The research will provide new insights and a mechanistic understanding of the complex oceanographic phenomena that regulate iron supply, primary production, and biogeochemical cycling. The research will thus form the basis for predictions about how this system may change in a warming climate. The broader impacts include training of graduate and undergraduate students, international collaboration, and partnership with several ongoing outreach programs that address scientific research in the Southern Ocean. The research also will contribute to the goals of the international research programs ICED (Integrated Climate and Ecosystem Dynamics) and GEOTRACES (Biogeochemical cycling and trace elements in the marine environment).", "east": 170.0, "geometry": "POINT(169 -65)", "instruments": "IN SITU/LABORATORY INSTRUMENTS \u003e CHEMICAL METERS/ANALYZERS \u003e FLUOROMETERS; IN SITU/LABORATORY INSTRUMENTS \u003e MAGNETIC/MOTION SENSORS \u003e GRAVIMETERS \u003e GRAVIMETERS; IN SITU/LABORATORY INSTRUMENTS \u003e PROFILERS/SOUNDERS \u003e PROFILERS; IN SITU/LABORATORY INSTRUMENTS \u003e RECORDERS/LOGGERS \u003e AWS; EARTH REMOTE SENSING INSTRUMENTS \u003e PASSIVE REMOTE SENSING \u003e POSITIONING/NAVIGATION \u003e GPS \u003e GPS; IN SITU/LABORATORY INSTRUMENTS \u003e PROFILERS/SOUNDERS \u003e XBT; EARTH REMOTE SENSING INSTRUMENTS \u003e ACTIVE REMOTE SENSING \u003e PROFILERS/SOUNDERS \u003e ACOUSTIC SOUNDERS \u003e ECHO SOUNDERS; IN SITU/LABORATORY INSTRUMENTS \u003e PROFILERS/SOUNDERS \u003e ACOUSTIC SOUNDERS \u003e MBES; IN SITU/LABORATORY INSTRUMENTS \u003e PROFILERS/SOUNDERS \u003e THERMOSALINOGRAPHS", "is_usap_dc": true, "keywords": "R/V NBP; Not provided", "locations": null, "north": -65.0, "nsf_funding_programs": "Antarctic Organisms and Ecosystems; Antarctic Organisms and Ecosystems", "paleo_time": null, "persons": "Smith, Walker; McGillicuddy, Dennis", "platforms": "Not provided; WATER-BASED PLATFORMS \u003e VESSELS \u003e SURFACE \u003e R/V NBP", "repo": "BCO-DMO", "repositories": "BCO-DMO; R2R", "science_programs": null, "south": -65.0, "title": "Collaborative Research: Impact of Mesoscale Processes on Iron Supply and Phytoplankton Dynamics in the Ross Sea", "uid": "p0000330", "west": 168.0}, {"awards": "0732535 Arrigo, Kevin", "bounds_geometry": "POLYGON((-130 -67,-127.1 -67,-124.2 -67,-121.3 -67,-118.4 -67,-115.5 -67,-112.6 -67,-109.7 -67,-106.8 -67,-103.9 -67,-101 -67,-101 -67.9,-101 -68.8,-101 -69.7,-101 -70.6,-101 -71.5,-101 -72.4,-101 -73.3,-101 -74.2,-101 -75.1,-101 -76,-103.9 -76,-106.8 -76,-109.7 -76,-112.6 -76,-115.5 -76,-118.4 -76,-121.3 -76,-124.2 -76,-127.1 -76,-130 -76,-130 -75.1,-130 -74.2,-130 -73.3,-130 -72.4,-130 -71.5,-130 -70.6,-130 -69.7,-130 -68.8,-130 -67.9,-130 -67))", "dataset_titles": "GEOTRACES International Data Assembly Centre Accession# NIO100280", "datasets": [{"dataset_uid": "000212", "doi": "", "keywords": null, "people": null, "repository": "GEOTRACES", "science_program": null, "title": "GEOTRACES International Data Assembly Centre Accession# NIO100280", "url": "http://www.bodc.ac.uk/geotraces/"}], "date_created": "Thu, 24 Feb 2011 00:00:00 GMT", "description": "IPY: Shedding dynamic light on iron limitation: The interplay of iron\u003cbr/\u003elimitation and dynamic irradiance in governing the phytoplankton\u003cbr/\u003edistribution in the Ross Sea\u003cbr/\u003e\u003cbr/\u003eThe Southern Ocean plays an important role in the global carbon cycle, accounting for approximately 25% of total anthropogenic CO2 uptake by the oceans, mainly via primary production. In the Ross Sea, primary production is dominated by two taxa that are distinct in location and timing. Diatoms dominate in the shallow mixed layer of the continental shelf, whereas the colony forming Phaeocystis antarctica (Prymnesiophyceae) dominate in the more deeply mixed, open regions. Significantly, both groups have vastly different nutrient utilization characteristics, and support very different marine food webs. Their responses to climate change, and the implications for carbon export, are unclear. Previous studies show that light availability and the quality of the light climate (static versus dynamic) play a major role in defining where and when the different phytoplankton taxa bloom. However, iron (Fe) limitation of the algal communities in both the sub-Arctic and the Southern Ocean is now well documented. Moreover, phytoplankton Fe demand varies as a function of irradiance. The main hypothesis of the proposed research is: The interaction between Fe limitation and dynamic irradiance governs phytoplankton distributions in the Ross Sea. Our strategy to test this hypothesis is three-fold: 1) The photoacclimation of the different phytoplankton taxa to different light conditions under Fe limitation will be investigated in experiments in the laboratory under controlled Fe conditions. 2) The photophysiological mechanisms found in these laboratory experiments will then be tested in the field on two cruises with international IPY partners. 3) Finally, data generated during the lab and field parts of the project will be used to parameterize a dynamic light component of the Coupled Ice Atmosphere and Ocean (CIAO) model of the Ross Sea. Using the improved model, we will run future climate scenarios to test the impact of climate change on the phytoplankton community structure, distribution, primary production and carbon export in the Southern Ocean. The proposed research complies with IPY theme\" Understanding Environmental change in Polar Regions\" and includes participation in an international cruise. Detailed model descriptions and all of the results generated from these studies will be made public via a DynaLiFe website. Improving the CIAO model will give us and other IPY partners the opportunity to test the ecological consequences of physiological characteristics observed in Antarctic phytoplankton under current and future climate scenarios. Outreach will include participation in Stanford\u0027s Summer Program for Professional Development for Science Teachers, Stanford\u0027s School of Earth Sciences high school internship program, and development of curriculum for local science training centers, including the Chabot Space and Science Center.", "east": -101.0, "geometry": "POINT(-115.5 -71.5)", "instruments": null, "is_usap_dc": true, "keywords": "Not provided", "locations": null, "north": -67.0, "nsf_funding_programs": "Antarctic Organisms and Ecosystems", "paleo_time": null, "persons": "Arrigo, Kevin", "platforms": "Not provided", "repo": "GEOTRACES", "repositories": "GEOTRACES", "science_programs": null, "south": -76.0, "title": "IPY: Shedding dynamic light on iron limitation: The interplay of iron limitation and dynamic irradiance in governing the phytoplankton distribution in the Ross Sea", "uid": "p0000112", "west": -130.0}, {"awards": "0444040 Zhou, Meng; 0230445 Measures, Christopher; 0443403 Measures, Christopher", "bounds_geometry": "POLYGON((-63 -60.3,-62 -60.3,-61 -60.3,-60 -60.3,-59 -60.3,-58 -60.3,-57 -60.3,-56 -60.3,-55 -60.3,-54 -60.3,-53 -60.3,-53 -60.77,-53 -61.24,-53 -61.71,-53 -62.18,-53 -62.65,-53 -63.12,-53 -63.59,-53 -64.06,-53 -64.53,-53 -65,-54 -65,-55 -65,-56 -65,-57 -65,-58 -65,-59 -65,-60 -65,-61 -65,-62 -65,-63 -65,-63 -64.53,-63 -64.06,-63 -63.59,-63 -63.12,-63 -62.65,-63 -62.18,-63 -61.71,-63 -61.24,-63 -60.77,-63 -60.3))", "dataset_titles": "Expedition Data", "datasets": [{"dataset_uid": "001663", "doi": "", "keywords": null, "people": null, "repository": "R2R", "science_program": null, "title": "Expedition Data", "url": "https://www.rvdata.us/search/cruise/LMG0402"}], "date_created": "Mon, 12 Jan 2009 00:00:00 GMT", "description": "The Shackleton Fracture Zone (SFZ) in the Drake Passage defines a boundary between low and high phytoplankton waters. West of Drake Passage, Southern Ocean waters south of the Polar Front and north of the Antarctic continent shelf have very low satellite-derived surface chlorophyll concentrations. Chlorophyll and mesoscale eddy kinetic energy are higher east of SFZ compared to values west of the ridge. In situ data from a 10-year survey of the region as part of the National Marine Fisheries Service\u0027s Antarctic Marine Living Resources program confirm the existence of a strong hydrographic and chlorophyll gradient in the region. An interdisciplinary team of scientists hypothesizes that bathymetry, including the 2000 m deep SFZ, influences mesoscale circulation and transport of iron leading to the observed phytoplankton patterns. To address this\u003cbr/\u003ehypothesis, the team proposes to examine phytoplankton and bacterial physiological states (including responses to iron enrichment) and structure of the plankton communities from virus to zooplankton, the concentration and distribution of Fe, Mn, and Al, and mesoscale flow patterns near the SFZ. Relationships between iron concentrations and phytoplankton characteristics will be examined in the context of the mesoscale transport of trace nutrients to determine how much of the observed variability in phytoplankton biomass can be attributed to iron supply, and to determine the most important sources of iron to pelagic waters east of the Drake Passage. The goal is to better understand how plankton productivity and community structure in the Southern Ocean are affected by the coupling between bathymetry, mesoscale circulation, and limiting nutrient distributions.\u003cbr/\u003e\u003cbr/\u003eThe research program includes rapid surface surveys of chemical, plankton, and hydrographic properties complemented by a mesoscale station grid for vertical profiles, water sampling, and bottle incubation enrichment experiments. Distributions of manganese and aluminum will be determined to help distinguish aeolian, continental shelf and upwelling sources of iron. The physiological state of the phytoplankton will be monitored by active fluorescence methods sensitive to the effects of iron limitation. Mass concentrations of pigment, carbon and nitrogen will be obtained by analysis of filtered samples, cell size distributions by flow cytometry, and species identification by microscopy. Primary production and photosynthesis parameters (absorption, quantum yields, variable fluorescence) will be measured on depth profiles, during surface surveys and on bulk samples from enrichment experiments. Viruses and bacteria will be examined for abundances, and bacterial production will be assessed in terms of whether it is limited by either iron or organic carbon sources. The proposed work will improve our understanding of processes controlling distributions of iron and the response of plankton communities in the Southern Ocean. This proposal also includes an outreach component comprised of Research Experiences for Undergraduates (REU), Teachers Experiencing the Antarctic and Arctic (TEA), and the creation of an educational website and K-12 curricular modules based on the project.", "east": -53.0, "geometry": "POINT(-58 -62.65)", "instruments": "IN SITU/LABORATORY INSTRUMENTS \u003e PROFILERS/SOUNDERS \u003e CTD; IN SITU/LABORATORY INSTRUMENTS \u003e PRESSURE/HEIGHT METERS \u003e PRESSURE SENSORS; IN SITU/LABORATORY INSTRUMENTS \u003e PHOTON/OPTICAL DETECTORS \u003e TURBIDITY METERS; EARTH REMOTE SENSING INSTRUMENTS \u003e PASSIVE REMOTE SENSING \u003e POSITIONING/NAVIGATION \u003e GPS \u003e GPS; IN SITU/LABORATORY INSTRUMENTS \u003e PROFILERS/SOUNDERS \u003e ACOUSTIC SOUNDERS \u003e ADCP", "is_usap_dc": true, "keywords": "R/V LMG", "locations": null, "north": -60.3, "nsf_funding_programs": "Antarctic Organisms and Ecosystems; Antarctic Organisms and Ecosystems; Antarctic Organisms and Ecosystems", "paleo_time": null, "persons": "Measures, Christopher; Selph, Karen; Zhou, Meng", "platforms": "WATER-BASED PLATFORMS \u003e VESSELS \u003e SURFACE \u003e R/V LMG", "repo": "R2R", "repositories": "R2R", "science_programs": null, "south": -65.0, "title": "Collaborative Research: Plankton Community Structure and Iron Distribution in the Southern Drake Passage", "uid": "p0000585", "west": -63.0}]

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