IEDA
Dataset Information
Phylogenomics of Antarctic notothenioid fishes
Cite as
Near, T., & Dornburg, A. (2020) "Phylogenomics of Antarctic notothenioid fishes" U.S. Antarctic Program (USAP) Data Center. doi: https://doi.org/None.
AMD - DIF Record(s)
Abstract
This data set contains alignments of DNA sequences obtained from restriction site associated markers (RADseq). Each alignment contains DNA sequence data sampled from 85 species of notothenioids fishes. The raw sequence data for each specimen is available on Genbank and accession numbers are included in the attached PDF. There are two DNA sequence alignments. The m4 alignment has each locus represented by at least 4 individuals and contains 4,440,378 aligned sites. The m30 has each locus represented by at least 30 individuals and contains 2,669,472 aligned sites.
Creator(s):
Near, Thomas; Dornburg, Alex
Date Created:
2020-03-05
Repository:
USAP-DC (current)
Spatial Extent(s)
West: -180, East: 180, South: -90, North: -60
Temporal Extent(s)
Start: 2017-01-01 - End: 2020-01-01
Award(s)
Version:
2
References
  1. Near, T.J., D.J. MacGuigan, E. Parker, C.D. Struthers, C.D. Jones, and A. Dornburg. 2018. The utility of restriction site associated DNA sequencing (RADseq) for resolving Cenozoic adaptive radiations: a case study of Antarctic notothenioid fishes. Molecular Phylogenetics and Evolution. 129:268-279 (doi:10.1016/j.ympev.2018.09.001)
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README_601264.txt
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MD5 Checksum: 613e55ef717238a2943a5a61c0e3ff2b File Type: Phylip Data Format

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MD5 Checksum: c30397cf6a7dfecd5ec940de86379b22 File Type: Phylip Data Format

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MD5 Checksum: 9a7da4b9244ca82c229f6640d386f7db File Type: AdobeĀ Portable Document FormatĀ (PDF)

This dataset has been downloaded 2 times since March 2017 (based on unique date-IP combinations)