{"dp_type": "Project", "free_text": "Microbial Mat"}
[{"awards": "2336354 Juarez Rivera, Marisol", "bounds_geometry": "POLYGON((160 -76.5,160.45 -76.5,160.9 -76.5,161.35 -76.5,161.8 -76.5,162.25 -76.5,162.7 -76.5,163.15 -76.5,163.6 -76.5,164.05 -76.5,164.5 -76.5,164.5 -76.7,164.5 -76.9,164.5 -77.1,164.5 -77.3,164.5 -77.5,164.5 -77.7,164.5 -77.9,164.5 -78.1,164.5 -78.3,164.5 -78.5,164.05 -78.5,163.6 -78.5,163.15 -78.5,162.7 -78.5,162.25 -78.5,161.8 -78.5,161.35 -78.5,160.9 -78.5,160.45 -78.5,160 -78.5,160 -78.3,160 -78.1,160 -77.9,160 -77.7,160 -77.5,160 -77.3,160 -77.1,160 -76.9,160 -76.7,160 -76.5))", "dataset_titles": "Lake Fryxell 2022-2023 benthic microbial mat thickness and number of laminae", "datasets": [{"dataset_uid": "601839", "doi": "10.15784/601839", "keywords": "Antarctica; Cryosphere; Dry Valleys; Lake Fryxell; Laminae; Microbial Mat; Thickness", "people": "Juarez Rivera, Marisol; Sumner, Dawn; Paul, Ann; Hawes, Ian; Mackey, Tyler", "repository": "USAP-DC", "science_program": null, "title": "Lake Fryxell 2022-2023 benthic microbial mat thickness and number of laminae", "url": "https://www.usap-dc.org/view/dataset/601839"}], "date_created": "Fri, 05 Jul 2024 00:00:00 GMT", "description": "Perennially ice-covered lakes in the McMurdo Dry Valleys of Antarctica contain abundant microbial mats, and the export of this mat material can fertilize the surrounding polar desert ecosystems. These desert soils are one of the most organic-poor on earth yet host a community of microorganisms. Microbial mat material is exported from the shallow, gas-supersaturated regions of the lakes when gas bubbles form in the mats, lifting them to the ice cover; the perennial ice cover maintains gas supersaturation. These mats freeze in and are exported to the surrounding soils through ice ablation. The largest seasonal decrease and thinnest ice cover in the history of Lake Fryxell was recorded during the 2022-2023 Austral summer. In this thin ice year, the water column dissolved oxygen increased over prior observations, and the lake bottom surface area with bubble-disrupted mat was more than double that observed in 1980-1981 and 2006-2007. This work will constrain mat mobilization within and out of Lake Fryxell in the McMurdo Dry Valleys during a period of unprecedented ice thinning to understand how future changing regional climate and predicted seasonal loss of lake ice cover will affect nutrient transport in the McMurdo Dry Valleys. Exceptional years of mat export are hypothesized to have the most significant impact on nutrient export to soil communities; variability in mat liftoff may thus play a role in the McMurdo Dry Valleys ecosystem response to changing climate. The perennial ice cover of lakes in the McMurdo Dry Valleys of Antarctica modulates the transfer of gasses, organic and inorganic material, between the lakes and surrounding soils. The export of biomass in these lakes is driven by the supersaturation of atmospheric gasses in the shallow regions under perennial ice cover. Gas bubbles nucleate in the mats, producing buoyancy that lifts them to the bottom of the ice, where they freeze in and are exported to the surrounding soils through ice ablation. These mats represent a significant source of biomass and nutrients to the McMurdo Dry Valleys soils, which are among the most organic-poor on earth. Nevertheless, this biomass remains unaccounted for in organic carbon cycling models for the McMurdo Dry Valleys. Ice cover data from the McMurdo Dry Valleys Long Term Ecological Research Project shows that the ice thickness has undergone cyclical variation over the last 40 years, reaching the largest seasonal decrease and thinnest ice-cover in the recorded history of Lake Fryxell during the 2022-2023 austral summer. Preliminary work shows that the surface area with mat liftoff at Lake Fryxell is more than double that observed in 1980-1981 and 2006-2007, coinciding with this unprecedented thinning of the ice-cover and an increase in the water column dissolved O2. This research will constrain biomass mobilization within and out of Lake Fryxell in the McMurdo Dry Valleys during a period of unprecedented ice thinning. The researchers hypothesize that a thinner ice cover promotes more biomass mobilization by 1) stimulating additional production of gas bubbles from the existing gas-supersaturated waters during summertime photosynthesis to create microbial mat liftoff and 2) promoting mat liftoff in deeper, thicker microbial mats, and 3) that this biomass can be traced into the soils by characterizing its chemistry and modeling the most likely depositional settings. This work will use microbial mat samples, lake dissolved oxygen and photosynthetically active radiation data and underwater drone footage documenting the depth distribution of liftoff mats in January 2023, and long-term ice cover thickness, photosynthetically active radiation, and lake level change data collected by the McMurdo Dry Valleys Long Term Ecological Research Project to test hypotheses 1-3. The dispersal of the liftoff mat exposed at Lake Fryxell surface will be modeled using a Hybrid Single-Particle Lagrangian Integrated Trajectory (HYSPLIT) model. Exceptional liftoff years like the present are hypothesized to have the most significant impact on the soil communities as the rates of soil respiration increase with the addition of carbon. However, continued warming in the next 10 - 40 years may result in seasonal loss of the ice cover and cessation of liftoff mat export. This award reflects NSF\u0027s statutory mission and has been deemed worthy of support through evaluation using the Foundation\u0027s intellectual merit and broader impacts review criteria.", "east": 164.5, "geometry": "POINT(162.25 -77.5)", "instruments": null, "is_usap_dc": true, "keywords": "Stable Isotopes; MINERALS; LAKE/POND; ISOTOPES; Organic Matter; McMurdo Dry Valleys; SEDIMENTARY ROCKS", "locations": "McMurdo Dry Valleys", "north": -76.5, "nsf_funding_programs": "Antarctic Earth Sciences; Antarctic Organisms and Ecosystems", "paleo_time": null, "persons": "Juarez Rivera, Marisol", "platforms": null, "repo": "USAP-DC", "repositories": "USAP-DC", "science_programs": null, "south": -78.5, "title": "RAPID: Is Biomass Mobilization at Ice-covered Lake Fryxell, Antarctica reaching a Critical Threshold?", "uid": "p0010467", "west": 160.0}, {"awards": "1744785 Barrett, John", "bounds_geometry": "POLYGON((-180 -77.62,-145.683 -77.62,-111.366 -77.62,-77.049 -77.62,-42.732 -77.62,-8.415 -77.62,25.902 -77.62,60.219 -77.62,94.536 -77.62,128.853 -77.62,163.17 -77.62,163.17 -77.618,163.17 -77.616,163.17 -77.614,163.17 -77.612,163.17 -77.61,163.17 -77.608,163.17 -77.606,163.17 -77.604,163.17 -77.602,163.17 -77.6,128.853 -77.6,94.536 -77.6,60.219 -77.6,25.902 -77.6,-8.415 -77.6,-42.732 -77.6,-77.049 -77.6,-111.366 -77.6,-145.683 -77.6,180 -77.6,178.319 -77.6,176.638 -77.6,174.957 -77.6,173.276 -77.6,171.595 -77.6,169.914 -77.6,168.233 -77.6,166.552 -77.6,164.871 -77.6,163.19 -77.6,163.19 -77.602,163.19 -77.604,163.19 -77.606,163.19 -77.608,163.19 -77.61,163.19 -77.612,163.19 -77.614,163.19 -77.616,163.19 -77.618,163.19 -77.62,164.871 -77.62,166.552 -77.62,168.233 -77.62,169.914 -77.62,171.595 -77.62,173.276 -77.62,174.957 -77.62,176.638 -77.62,178.319 -77.62,-180 -77.62))", "dataset_titles": "McMurdo Dry Valleys LTER: Microbial mat biomass and Normalized Difference Vegetation Index (NDVI) values from Lake Fryxell Basin, Antarctica", "datasets": [{"dataset_uid": "200260", "doi": "doi:10.6073/pasta/9acbbde9abc1e013f8c9fd9c383327f4", "keywords": null, "people": null, "repository": "EDI", "science_program": null, "title": "McMurdo Dry Valleys LTER: Microbial mat biomass and Normalized Difference Vegetation Index (NDVI) values from Lake Fryxell Basin, Antarctica", "url": "https://doi.org/10.6073/pasta/9acbbde9abc1e013f8c9fd9c383327f4"}], "date_created": "Tue, 30 Nov 2021 00:00:00 GMT", "description": "Microbial mats are found throughout the McMurdo Dry Valleys where summer snowmelt provides liquid water that allows these mats to flourish. Researchers have long studied the environmental conditions microbial mats need to grow. Despite these efforts, it has been difficult to develop a broad picture of these unique ecosystems. Recent advances in satellite technology now provide researchers an exciting new tool to study these special Antarctic ecosystems from space using the unique spectral signatures associated with microbial mats. This new technology not only offers the promise that microbial mats can be mapped and studied from space, this research will also help protect these delicate environments from potentially harmful human impacts that can occur when studying them from the ground. This project will use satellite imagery and spectroscopic techniques to identify and map microbial mat communities and relate their properties and distributions to both field and lab-based measurements. This research provides an exciting new tool to help document and understand the distribution of a major component of the Antarctic ecosystem in the McMurdo Dry Valleys. The goal of this project is to establish quantitative relationships between spectral signatures derived from orbit and the physiological status and biogeochemical properties of microbial mat communities in Taylor Valley, Antarctica, as measured by field and laboratory analyses on collected samples. The goal wioll be met by (1) refining atmospheric correction techniques using in situ radiometric rectification to derive accurate surface spectra; (2) collecting multispectral orbital images concurrent with in situ sampling and spectral measurements in the field to ensure temporal comparability; (3) measuring sediment, water, and microbial mat samples for organic and inorganic carbon content, essential biogeochemical nutrients, and chlorophyll-a to determine relevant mat characteristics; and (4) quantitatively associating these laboratory-derived characteristics with field-derived and orbital spectral signatures and parameters. The result of this work will be a more robust quantitative link between the distribution of microbial mat communities and their biogeochemical properties to landscape-scale spectral signatures. This award reflects NSF\u0027s statutory mission and has been deemed worthy of support through evaluation using the Foundation\u0027s intellectual merit and broader impacts review criteria.", "east": 163.19, "geometry": "POINT(-16.82 -77.61)", "instruments": null, "is_usap_dc": true, "keywords": "AMD; ECOSYSTEM FUNCTIONS; FIELD SURVEYS; USAP-DC; USA/NSF; Taylor Valley; Amd/Us", "locations": "Taylor Valley", "north": -77.6, "nsf_funding_programs": "Antarctic Organisms and Ecosystems", "paleo_time": null, "persons": "Barrett, John; Salvatore, Mark", "platforms": "LAND-BASED PLATFORMS \u003e FIELD SITES \u003e FIELD SURVEYS", "repo": "EDI", "repositories": "EDI", "science_programs": null, "south": -77.62, "title": "Collaborative Research: Remote characterization of microbial mats in Taylor Valley, Antarctica through in situ sampling and spectral validation", "uid": "p0010281", "west": 163.17}, {"awards": "1937748 Sumner, Dawn", "bounds_geometry": "POINT(163.183333 -77.616667)", "dataset_titles": "Lake Fryxell 2022-2023 benthic microbial mat thickness and number of laminae", "datasets": [{"dataset_uid": "601839", "doi": "10.15784/601839", "keywords": "Antarctica; Cryosphere; Dry Valleys; Lake Fryxell; Laminae; Microbial Mat; Thickness", "people": "Juarez Rivera, Marisol; Sumner, Dawn; Paul, Ann; Hawes, Ian; Mackey, Tyler", "repository": "USAP-DC", "science_program": null, "title": "Lake Fryxell 2022-2023 benthic microbial mat thickness and number of laminae", "url": "https://www.usap-dc.org/view/dataset/601839"}], "date_created": "Wed, 30 Jun 2021 00:00:00 GMT", "description": "Part I: Non-technical summary: This project focuses on understanding annual changes in microbial life that grows on the bottom of Lake Fryxell, Antarctica. Because of its polar latitude, photosynthesis can only occur during the summer months. During summer, photosynthetic bacteria supply communities with energy and oxygen. However, it is unknown how the microbes behave in the dark winter, when observations are not possible. This project will install environmental monitors and light-blocking shades over parts of these communities. The shades will extend winter conditions into the spring to allow researchers to characterize the winter behavior of the microbial communities. Researchers will measure changes in the water chemistry due to microbial activities when the shades are removed and the mats first receive light. Results are expected to provide insights into how organisms interact with and change their environments. The project includes training of graduate students and early career scientists in fieldwork, including scientific ice diving techniques. In addition, the members of the project team will develop a web-based \u201cGuide to Thrive\u201d, which will compile field tips ranging from basic gear use to advanced environmental protection techniques. This will be a valuable resource for group leaders ranging from undergraduate teaching assistants to Antarctic expedition leaders to lead well-planned and tailored field expeditions. Part II: Technical summary: The research team will measure seasonal metabolic and biogeochemical changes in benthic mats using differential gene expression and geochemical gradients. They will identify seasonal phenotypic differences in microbial communities and ecosystem effects induced by spring oxygen production. To do so, researchers will install environmental sensors and opaque shades over mats at three depths in the lake. The following spring, shaded and unshaded mats will be sampled. The shades will then be removed, and changes in pore water O2, H2S, pH, and redox will be measured using microelectrodes. Mats will also be sampled for transcriptomic gene expression analyses at intervals guided by geochemical changes. Pore water will be sampled for nutrient analyses. Field research will be supplemented with laboratory experiments to refine field techniques, gene expression data analysis, and integration of results into a seasonal model of productivity and nitrogen cycling in Lake Fryxell. Results will provide insights into several key priorities for NSF, including how biotic, abiotic and environmental components of the benthic mats interact to affect Antarctic lakes. This award reflects NSF\u0027s statutory mission and has been deemed worthy of support through evaluation using the Foundation\u0027s intellectual merit and broader impacts review criteria.", "east": 163.183333, "geometry": "POINT(163.183333 -77.616667)", "instruments": null, "is_usap_dc": true, "keywords": "Antarctica; Microbial Activity; Microbial Diversity; Microbial Mat; Genomics; FIELD SURVEYS; ECOSYSTEM FUNCTIONS; Benthic Ecology; Lake Fryxell; LAKE/POND", "locations": "Antarctica; Lake Fryxell", "north": -77.616667, "nsf_funding_programs": "Antarctic Integrated System Science; Antarctic Organisms and Ecosystems", "paleo_time": null, "persons": "Sumner, Dawn; Mackey, Tyler", "platforms": "LAND-BASED PLATFORMS \u003e FIELD SITES \u003e FIELD SURVEYS", "repo": "USAP-DC", "repositories": "USAP-DC", "science_programs": null, "south": -77.616667, "title": "Seasonal Primary Productivity and Nitrogen Cycling in Photosynthetic Mats, Lake Fryxell, McMurdo Dry Valleys", "uid": "p0010219", "west": 163.183333}, {"awards": "1745341 Sumner, Dawn", "bounds_geometry": "POLYGON((161.595 -77.527,161.5953 -77.527,161.5956 -77.527,161.5959 -77.527,161.5962 -77.527,161.5965 -77.527,161.5968 -77.527,161.5971 -77.527,161.5974 -77.527,161.5977 -77.527,161.598 -77.527,161.598 -77.5271,161.598 -77.5272,161.598 -77.5273,161.598 -77.5274,161.598 -77.5275,161.598 -77.5276,161.598 -77.5277,161.598 -77.5278,161.598 -77.5279,161.598 -77.528,161.5977 -77.528,161.5974 -77.528,161.5971 -77.528,161.5968 -77.528,161.5965 -77.528,161.5962 -77.528,161.5959 -77.528,161.5956 -77.528,161.5953 -77.528,161.595 -77.528,161.595 -77.5279,161.595 -77.5278,161.595 -77.5277,161.595 -77.5276,161.595 -77.5275,161.595 -77.5274,161.595 -77.5273,161.595 -77.5272,161.595 -77.5271,161.595 -77.527))", "dataset_titles": "GP0191362, Gp0191371; JAAXLU000000000, JAAXLT000000000", "datasets": [{"dataset_uid": "200151", "doi": "", "keywords": null, "people": null, "repository": "NCBI GenBank", "science_program": null, "title": "JAAXLU000000000, JAAXLT000000000", "url": "https://www.ncbi.nlm.nih.gov/nuccore/JAAXLU000000000"}, {"dataset_uid": "200152", "doi": "", "keywords": null, "people": null, "repository": "IMG Gold", "science_program": null, "title": "GP0191362, Gp0191371", "url": "https://gold.jgi.doe.gov/study?id=Gs0127369"}], "date_created": "Mon, 22 Jun 2020 00:00:00 GMT", "description": "Atmospheric oxygen rose suddenly approximately 2.4 billion years ago after Cyanobacteria evolved the ability to produce oxygen through photosynthesis (oxygenic photosynthesis). This change permanently altered the future of life on Earth, yet little is known about the evolutionary processes leading to it. The Melainabacteria were first discovered in 2013 and are closely related non-photosynthetic relatives of the first group of organisms capable of oxygenic photosynthesis. This project will utilize existing data on metagenomes from microbial mats in Lake Vanda, an ice-covered lake in Antarctica where many sequences of Melainabacteria have been previously identified. From this genetic information, the project aims to assess the metabolic capabilities of these Melainabacteria and identify their potential ecological roles. The project will additionally evaluate the evolutionary relationships among the Cyanobacteria and Melainabacteria and closely related organisms that will allow an advancement in understanding of the evolutionary path that lead to oxygenic photosynthesis on Earth. The project will focus on extracting evolutionary information from the genomic data of Melainabacteria and Sericytochromatia, recently-described groups closely related to but basal to the Cyanobacteria. The characterization of novel members of these groups in samples from Lake Vanda, Antarctica, will provide insights into the path and processes involved in the evolution of oxygenic photosynthesis. The research will focus on assessing the metabolic capabilities of Melainabacteri, deriving the evolutionary relationships among Melainabacteria and Cyanobacteria and reconstructing potential evolutionary pathways leading to oxygenic photosynthesis. The project will focus on 12 metagenomes where the researchers expect to obtain genomes for at least the eight most abundant Melainabacteria in the dataset. Melainabacteria bins will be annotated and preliminary metabolic pathways will be constructed. The project will utilize full-length sequences of marker genes from across the bacterial domain with a particular focus on taxa that are oxygenic or anoxygenic phototrophs and use the marker genes, to build a rooted \"backbone\" tree. Incomplete or short sequences from the metagenomes will be added to the tree using the Evolutionary Placement Algorithm. The researchers will also build a corresponding phylogenetic tree using a Bayesian framework and compare their topologies. By doing so, the project aims to improve the understanding of the evolution of oxygenic photosynthesis, which caused the most significant change in Earth\u0027s surface chemistry. Specifically, they will document a significantly broader metabolic diversity within the Melainabacteria than has been previously identified, gain significant insights into their metabolic evolution, their evolutionary relationships with the Cyanobacteria, and the evolutionary steps leading to the origin of oxygenic photosynthesis. This research will have the overall effect of constraining key evolutionary processes in the origin of oxygenic photosynthesis. It will provide the foundation for future studies by indicating where a genomic record of the evolution of oxygenic photosynthesis may be preserved. Results will also be shared with middle school children through the development of scientific lesson plans in collaboration with teachers. This award reflects NSF\u0027s statutory mission and has been deemed worthy of support through evaluation using the Foundation\u0027s intellectual merit and broader impacts review criteria.", "east": 161.598, "geometry": "POINT(161.5965 -77.5275)", "instruments": null, "is_usap_dc": true, "keywords": "USAP-DC; FIELD INVESTIGATION; CYANOBACTERIA (BLUE-GREEN ALGAE); Lake Vanda; LABORATORY; LAKE/POND; Genetic Analysis", "locations": "Lake Vanda", "north": -77.527, "nsf_funding_programs": "Antarctic Organisms and Ecosystems", "paleo_time": null, "persons": "Sumner, Dawn; Eisen, Jonathan; Tazi, Loubna", "platforms": "LAND-BASED PLATFORMS \u003e FIELD SITES \u003e FIELD INVESTIGATION; OTHER \u003e PHYSICAL MODELS \u003e LABORATORY", "repo": "NCBI GenBank", "repositories": "IMG Gold; NCBI GenBank", "science_programs": null, "south": -77.528, "title": "Evolution of Oxygenic Photosynthesis as Preserved in Melainabacterial Genomes from Lake Vanda, Antarctica", "uid": "p0010112", "west": 161.595}, {"awards": "1745053 Salvatore, Mark; 1744849 Sokol, Eric; 1744785 Barrett, John", "bounds_geometry": "POLYGON((162.92 -77.56,162.971 -77.56,163.022 -77.56,163.073 -77.56,163.124 -77.56,163.175 -77.56,163.226 -77.56,163.277 -77.56,163.328 -77.56,163.379 -77.56,163.43 -77.56,163.43 -77.571,163.43 -77.582,163.43 -77.593,163.43 -77.604,163.43 -77.615,163.43 -77.626,163.43 -77.637,163.43 -77.648,163.43 -77.659,163.43 -77.67,163.379 -77.67,163.328 -77.67,163.277 -77.67,163.226 -77.67,163.175 -77.67,163.124 -77.67,163.073 -77.67,163.022 -77.67,162.971 -77.67,162.92 -77.67,162.92 -77.659,162.92 -77.648,162.92 -77.637,162.92 -77.626,162.92 -77.615,162.92 -77.604,162.92 -77.593,162.92 -77.582,162.92 -77.571,162.92 -77.56))", "dataset_titles": "McMurdo Dry Valleys LTER: Microbial mat biomass and Normalized Difference Vegetation Index (NDVI) values from Lake Fryxell Basin, Antarctica, January 2018", "datasets": [{"dataset_uid": "200344", "doi": "10.6073/pasta/9acbbde9abc1e013f8c9fd9c383327f4", "keywords": null, "people": null, "repository": "EDI", "science_program": null, "title": "McMurdo Dry Valleys LTER: Microbial mat biomass and Normalized Difference Vegetation Index (NDVI) values from Lake Fryxell Basin, Antarctica, January 2018", "url": "https://portal.edirepository.org/nis/mapbrowse?packageid=knb-lter-mcm.263.1"}], "date_created": "Wed, 03 Jul 2019 00:00:00 GMT", "description": "Microbial mats are found throughout the McMurdo Dry Valleys where summer snowmelt provides liquid water that allows these mats to flourish. Researchers have long studied the environmental conditions microbial mats need to grow. Despite these efforts, it has been difficult to develop a broad picture of these unique ecosystems. Recent advances in satellite technology now provide researchers an exciting new tool to study these special Antarctic ecosystems from space using the unique spectral signatures associated with microbial mats. This new technology not only offers the promise that microbial mats can be mapped and studied from space, this research will also help protect these delicate environments from potentially harmful human impacts that can occur when studying them from the ground. This project will use satellite imagery and spectroscopic techniques to identify and map microbial mat communities and relate their properties and distributions to both field and lab-based measurements. This research provides an exciting new tool to help document and understand the distribution of a major component of the Antarctic ecosystem in the McMurdo Dry Valleys. The goal of this project is to establish quantitative relationships between spectral signatures derived from orbit and the physiological status and biogeochemical properties of microbial mat communities in Taylor Valley, Antarctica, as measured by field and laboratory analyses on collected samples. The goal wioll be met by (1) refining atmospheric correction techniques using in situ radiometric rectification to derive accurate surface spectra; (2) collecting multispectral orbital images concurrent with in situ sampling and spectral measurements in the field to ensure temporal comparability; (3) measuring sediment, water, and microbial mat samples for organic and inorganic carbon content, essential biogeochemical nutrients, and chlorophyll-a to determine relevant mat characteristics; and (4) quantitatively associating these laboratory-derived characteristics with field-derived and orbital spectral signatures and parameters. The result of this work will be a more robust quantitative link between the distribution of microbial mat communities and their biogeochemical properties to landscape-scale spectral signatures. This award reflects NSF\u0027s statutory mission and has been deemed worthy of support through evaluation using the Foundation\u0027s intellectual merit and broader impacts review criteria.", "east": 163.43, "geometry": "POINT(163.175 -77.615)", "instruments": null, "is_usap_dc": true, "keywords": "RIVERS/STREAM; CYANOBACTERIA (BLUE-GREEN ALGAE); USAP-DC; Taylor Valley; INFRARED IMAGERY; WORLDVIEW-2; WORLDVIEW-3; Antarctica; FIELD INVESTIGATION; Amd/Us; ACTIVE LAYER", "locations": "Antarctica; Taylor Valley", "north": -77.56, "nsf_funding_programs": "Antarctic Organisms and Ecosystems; Antarctic Organisms and Ecosystems; Antarctic Organisms and Ecosystems", "paleo_time": null, "persons": "Salvatore, Mark; Barrett, John; Sokol, Eric", "platforms": "LAND-BASED PLATFORMS \u003e FIELD SITES \u003e FIELD INVESTIGATION; SPACE-BASED PLATFORMS \u003e EARTH OBSERVATION SATELLITES \u003e WORLDVIEW \u003e WORLDVIEW-2; SPACE-BASED PLATFORMS \u003e EARTH OBSERVATION SATELLITES \u003e WORLDVIEW \u003e WORLDVIEW-3", "repo": "EDI", "repositories": "EDI", "science_programs": null, "south": -77.67, "title": "COLLABORATIVE RESEARCH: Remote Characterization of Microbial Mats in Taylor Valley, Antarctica, through In Situ Sampling and Spectral Validation", "uid": "p0010036", "west": 162.92}, {"awards": "0739648 Cary, Stephen", "bounds_geometry": "POINT(163 -77.5)", "dataset_titles": "Biogeochemistry of Cyanobactrial Mats and Hyporheic Zone Microbes in McMurdo Dry Valley Glacial Meltwater Streams", "datasets": [{"dataset_uid": "600079", "doi": "10.15784/600079", "keywords": "Antarctica; Biota; Cell Counts; Dry Valleys; Microbiology", "people": "Cary, S. Craig", "repository": "USAP-DC", "science_program": null, "title": "Biogeochemistry of Cyanobactrial Mats and Hyporheic Zone Microbes in McMurdo Dry Valley Glacial Meltwater Streams", "url": "https://www.usap-dc.org/view/dataset/600079"}], "date_created": "Tue, 10 Dec 2013 00:00:00 GMT", "description": "The glacial streams of the McMurdo Dry Valleys have extensive cyanobacterial mats that are a probable source of fixed C and N to the Valleys. The research will examine the interplay between the microbial mats in the ephemeral glacial streams and the microbiota of the hyporheic soils (wetted soil zone) underlying and adjacent to those mats. It is hypothesized that the mats are important sources of organic carbon and fixed nitrogen for the soil communities of the hyporheic zone, and release dissolved organic carbon (DOC) and nitrogen (DON) that serves the entire Dry Valley ecosystem. Field efforts will entail both observational and experimental components. Direct comparisons will be made between the mats and microbial populations underlying naturally rehydrated and desiccated mat areas, and between mat areas in the melt streams of the Adams and Miers Glaciers in Miers Valley. Both physiological and phylogenetic indices of the soil microbiota will be examined. Observations will include estimates of rates of mat carbon and nitrogen fixation, soil respiration and leucine and thymidine uptake (as measures of protein \u0026 DNA synthesis, respectively) by soil bacteria, bacterial densities and their molecular ecology. Experimental manipulations will include experimental re-wetting of soils and observations of the time course of response of the microbial community. The research will integrate modern molecular genetic approaches (ARISA-DNA fingerprinting and ultra deep 16S rDNA microbial phylogenetic analysis) with geochemistry to study the diversity, ecology, and function of microbial communities that thrive in these extreme environments. The broader impacts of the project include research and educational opportunities for graduate students and a postdoctoral associate. The P.I.s will involve undergraduates as work-study students and in REU programs, and will participate in educational and outreach programs.", "east": 163.0, "geometry": "POINT(163 -77.5)", "instruments": null, "is_usap_dc": true, "keywords": "Not provided", "locations": null, "north": -77.5, "nsf_funding_programs": "Antarctic Organisms and Ecosystems", "paleo_time": null, "persons": "Cary, Stephen", "platforms": "Not provided", "repo": "USAP-DC", "repositories": "USAP-DC", "science_programs": null, "south": -77.5, "title": "Collaborative Research: Biogeochemistry of Cyanobactrial Mats and Hyporheic Zone Microbes in McMurdo Dry Valley Glacial Meltwater Streams", "uid": "p0000476", "west": 163.0}]
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Defining a search area on the Results Map
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Older retrieved projects from AMD. Warning: many have incomplete information.
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Project Title/Abstract/Map | NSF Award(s) | Date Created | PIs / Scientists | Dataset Links and Repositories | Abstract | Bounds Geometry | Geometry | Selected | Visible | |||||
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RAPID: Is Biomass Mobilization at Ice-covered Lake Fryxell, Antarctica reaching a Critical Threshold?
|
2336354 |
2024-07-05 | Juarez Rivera, Marisol |
|
Perennially ice-covered lakes in the McMurdo Dry Valleys of Antarctica contain abundant microbial mats, and the export of this mat material can fertilize the surrounding polar desert ecosystems. These desert soils are one of the most organic-poor on earth yet host a community of microorganisms. Microbial mat material is exported from the shallow, gas-supersaturated regions of the lakes when gas bubbles form in the mats, lifting them to the ice cover; the perennial ice cover maintains gas supersaturation. These mats freeze in and are exported to the surrounding soils through ice ablation. The largest seasonal decrease and thinnest ice cover in the history of Lake Fryxell was recorded during the 2022-2023 Austral summer. In this thin ice year, the water column dissolved oxygen increased over prior observations, and the lake bottom surface area with bubble-disrupted mat was more than double that observed in 1980-1981 and 2006-2007. This work will constrain mat mobilization within and out of Lake Fryxell in the McMurdo Dry Valleys during a period of unprecedented ice thinning to understand how future changing regional climate and predicted seasonal loss of lake ice cover will affect nutrient transport in the McMurdo Dry Valleys. Exceptional years of mat export are hypothesized to have the most significant impact on nutrient export to soil communities; variability in mat liftoff may thus play a role in the McMurdo Dry Valleys ecosystem response to changing climate. The perennial ice cover of lakes in the McMurdo Dry Valleys of Antarctica modulates the transfer of gasses, organic and inorganic material, between the lakes and surrounding soils. The export of biomass in these lakes is driven by the supersaturation of atmospheric gasses in the shallow regions under perennial ice cover. Gas bubbles nucleate in the mats, producing buoyancy that lifts them to the bottom of the ice, where they freeze in and are exported to the surrounding soils through ice ablation. These mats represent a significant source of biomass and nutrients to the McMurdo Dry Valleys soils, which are among the most organic-poor on earth. Nevertheless, this biomass remains unaccounted for in organic carbon cycling models for the McMurdo Dry Valleys. Ice cover data from the McMurdo Dry Valleys Long Term Ecological Research Project shows that the ice thickness has undergone cyclical variation over the last 40 years, reaching the largest seasonal decrease and thinnest ice-cover in the recorded history of Lake Fryxell during the 2022-2023 austral summer. Preliminary work shows that the surface area with mat liftoff at Lake Fryxell is more than double that observed in 1980-1981 and 2006-2007, coinciding with this unprecedented thinning of the ice-cover and an increase in the water column dissolved O2. This research will constrain biomass mobilization within and out of Lake Fryxell in the McMurdo Dry Valleys during a period of unprecedented ice thinning. The researchers hypothesize that a thinner ice cover promotes more biomass mobilization by 1) stimulating additional production of gas bubbles from the existing gas-supersaturated waters during summertime photosynthesis to create microbial mat liftoff and 2) promoting mat liftoff in deeper, thicker microbial mats, and 3) that this biomass can be traced into the soils by characterizing its chemistry and modeling the most likely depositional settings. This work will use microbial mat samples, lake dissolved oxygen and photosynthetically active radiation data and underwater drone footage documenting the depth distribution of liftoff mats in January 2023, and long-term ice cover thickness, photosynthetically active radiation, and lake level change data collected by the McMurdo Dry Valleys Long Term Ecological Research Project to test hypotheses 1-3. The dispersal of the liftoff mat exposed at Lake Fryxell surface will be modeled using a Hybrid Single-Particle Lagrangian Integrated Trajectory (HYSPLIT) model. Exceptional liftoff years like the present are hypothesized to have the most significant impact on the soil communities as the rates of soil respiration increase with the addition of carbon. However, continued warming in the next 10 - 40 years may result in seasonal loss of the ice cover and cessation of liftoff mat export. This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria. | POLYGON((160 -76.5,160.45 -76.5,160.9 -76.5,161.35 -76.5,161.8 -76.5,162.25 -76.5,162.7 -76.5,163.15 -76.5,163.6 -76.5,164.05 -76.5,164.5 -76.5,164.5 -76.7,164.5 -76.9,164.5 -77.1,164.5 -77.3,164.5 -77.5,164.5 -77.7,164.5 -77.9,164.5 -78.1,164.5 -78.3,164.5 -78.5,164.05 -78.5,163.6 -78.5,163.15 -78.5,162.7 -78.5,162.25 -78.5,161.8 -78.5,161.35 -78.5,160.9 -78.5,160.45 -78.5,160 -78.5,160 -78.3,160 -78.1,160 -77.9,160 -77.7,160 -77.5,160 -77.3,160 -77.1,160 -76.9,160 -76.7,160 -76.5)) | POINT(162.25 -77.5) | false | false | |||||
Collaborative Research: Remote characterization of microbial mats in Taylor Valley, Antarctica through in situ sampling and spectral validation
|
1744785 |
2021-11-30 | Barrett, John; Salvatore, Mark |
|
Microbial mats are found throughout the McMurdo Dry Valleys where summer snowmelt provides liquid water that allows these mats to flourish. Researchers have long studied the environmental conditions microbial mats need to grow. Despite these efforts, it has been difficult to develop a broad picture of these unique ecosystems. Recent advances in satellite technology now provide researchers an exciting new tool to study these special Antarctic ecosystems from space using the unique spectral signatures associated with microbial mats. This new technology not only offers the promise that microbial mats can be mapped and studied from space, this research will also help protect these delicate environments from potentially harmful human impacts that can occur when studying them from the ground. This project will use satellite imagery and spectroscopic techniques to identify and map microbial mat communities and relate their properties and distributions to both field and lab-based measurements. This research provides an exciting new tool to help document and understand the distribution of a major component of the Antarctic ecosystem in the McMurdo Dry Valleys. The goal of this project is to establish quantitative relationships between spectral signatures derived from orbit and the physiological status and biogeochemical properties of microbial mat communities in Taylor Valley, Antarctica, as measured by field and laboratory analyses on collected samples. The goal wioll be met by (1) refining atmospheric correction techniques using in situ radiometric rectification to derive accurate surface spectra; (2) collecting multispectral orbital images concurrent with in situ sampling and spectral measurements in the field to ensure temporal comparability; (3) measuring sediment, water, and microbial mat samples for organic and inorganic carbon content, essential biogeochemical nutrients, and chlorophyll-a to determine relevant mat characteristics; and (4) quantitatively associating these laboratory-derived characteristics with field-derived and orbital spectral signatures and parameters. The result of this work will be a more robust quantitative link between the distribution of microbial mat communities and their biogeochemical properties to landscape-scale spectral signatures. This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria. | POLYGON((-180 -77.62,-145.683 -77.62,-111.366 -77.62,-77.049 -77.62,-42.732 -77.62,-8.415 -77.62,25.902 -77.62,60.219 -77.62,94.536 -77.62,128.853 -77.62,163.17 -77.62,163.17 -77.618,163.17 -77.616,163.17 -77.614,163.17 -77.612,163.17 -77.61,163.17 -77.608,163.17 -77.606,163.17 -77.604,163.17 -77.602,163.17 -77.6,128.853 -77.6,94.536 -77.6,60.219 -77.6,25.902 -77.6,-8.415 -77.6,-42.732 -77.6,-77.049 -77.6,-111.366 -77.6,-145.683 -77.6,180 -77.6,178.319 -77.6,176.638 -77.6,174.957 -77.6,173.276 -77.6,171.595 -77.6,169.914 -77.6,168.233 -77.6,166.552 -77.6,164.871 -77.6,163.19 -77.6,163.19 -77.602,163.19 -77.604,163.19 -77.606,163.19 -77.608,163.19 -77.61,163.19 -77.612,163.19 -77.614,163.19 -77.616,163.19 -77.618,163.19 -77.62,164.871 -77.62,166.552 -77.62,168.233 -77.62,169.914 -77.62,171.595 -77.62,173.276 -77.62,174.957 -77.62,176.638 -77.62,178.319 -77.62,-180 -77.62)) | POINT(-16.82 -77.61) | false | false | |||||
Seasonal Primary Productivity and Nitrogen Cycling in Photosynthetic Mats, Lake Fryxell, McMurdo Dry Valleys
|
1937748 |
2021-06-30 | Sumner, Dawn; Mackey, Tyler |
|
Part I: Non-technical summary: This project focuses on understanding annual changes in microbial life that grows on the bottom of Lake Fryxell, Antarctica. Because of its polar latitude, photosynthesis can only occur during the summer months. During summer, photosynthetic bacteria supply communities with energy and oxygen. However, it is unknown how the microbes behave in the dark winter, when observations are not possible. This project will install environmental monitors and light-blocking shades over parts of these communities. The shades will extend winter conditions into the spring to allow researchers to characterize the winter behavior of the microbial communities. Researchers will measure changes in the water chemistry due to microbial activities when the shades are removed and the mats first receive light. Results are expected to provide insights into how organisms interact with and change their environments. The project includes training of graduate students and early career scientists in fieldwork, including scientific ice diving techniques. In addition, the members of the project team will develop a web-based “Guide to Thrive”, which will compile field tips ranging from basic gear use to advanced environmental protection techniques. This will be a valuable resource for group leaders ranging from undergraduate teaching assistants to Antarctic expedition leaders to lead well-planned and tailored field expeditions. Part II: Technical summary: The research team will measure seasonal metabolic and biogeochemical changes in benthic mats using differential gene expression and geochemical gradients. They will identify seasonal phenotypic differences in microbial communities and ecosystem effects induced by spring oxygen production. To do so, researchers will install environmental sensors and opaque shades over mats at three depths in the lake. The following spring, shaded and unshaded mats will be sampled. The shades will then be removed, and changes in pore water O2, H2S, pH, and redox will be measured using microelectrodes. Mats will also be sampled for transcriptomic gene expression analyses at intervals guided by geochemical changes. Pore water will be sampled for nutrient analyses. Field research will be supplemented with laboratory experiments to refine field techniques, gene expression data analysis, and integration of results into a seasonal model of productivity and nitrogen cycling in Lake Fryxell. Results will provide insights into several key priorities for NSF, including how biotic, abiotic and environmental components of the benthic mats interact to affect Antarctic lakes. This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria. | POINT(163.183333 -77.616667) | POINT(163.183333 -77.616667) | false | false | |||||
Evolution of Oxygenic Photosynthesis as Preserved in Melainabacterial Genomes from Lake Vanda, Antarctica
|
1745341 |
2020-06-22 | Sumner, Dawn; Eisen, Jonathan; Tazi, Loubna |
|
Atmospheric oxygen rose suddenly approximately 2.4 billion years ago after Cyanobacteria evolved the ability to produce oxygen through photosynthesis (oxygenic photosynthesis). This change permanently altered the future of life on Earth, yet little is known about the evolutionary processes leading to it. The Melainabacteria were first discovered in 2013 and are closely related non-photosynthetic relatives of the first group of organisms capable of oxygenic photosynthesis. This project will utilize existing data on metagenomes from microbial mats in Lake Vanda, an ice-covered lake in Antarctica where many sequences of Melainabacteria have been previously identified. From this genetic information, the project aims to assess the metabolic capabilities of these Melainabacteria and identify their potential ecological roles. The project will additionally evaluate the evolutionary relationships among the Cyanobacteria and Melainabacteria and closely related organisms that will allow an advancement in understanding of the evolutionary path that lead to oxygenic photosynthesis on Earth. The project will focus on extracting evolutionary information from the genomic data of Melainabacteria and Sericytochromatia, recently-described groups closely related to but basal to the Cyanobacteria. The characterization of novel members of these groups in samples from Lake Vanda, Antarctica, will provide insights into the path and processes involved in the evolution of oxygenic photosynthesis. The research will focus on assessing the metabolic capabilities of Melainabacteri, deriving the evolutionary relationships among Melainabacteria and Cyanobacteria and reconstructing potential evolutionary pathways leading to oxygenic photosynthesis. The project will focus on 12 metagenomes where the researchers expect to obtain genomes for at least the eight most abundant Melainabacteria in the dataset. Melainabacteria bins will be annotated and preliminary metabolic pathways will be constructed. The project will utilize full-length sequences of marker genes from across the bacterial domain with a particular focus on taxa that are oxygenic or anoxygenic phototrophs and use the marker genes, to build a rooted "backbone" tree. Incomplete or short sequences from the metagenomes will be added to the tree using the Evolutionary Placement Algorithm. The researchers will also build a corresponding phylogenetic tree using a Bayesian framework and compare their topologies. By doing so, the project aims to improve the understanding of the evolution of oxygenic photosynthesis, which caused the most significant change in Earth's surface chemistry. Specifically, they will document a significantly broader metabolic diversity within the Melainabacteria than has been previously identified, gain significant insights into their metabolic evolution, their evolutionary relationships with the Cyanobacteria, and the evolutionary steps leading to the origin of oxygenic photosynthesis. This research will have the overall effect of constraining key evolutionary processes in the origin of oxygenic photosynthesis. It will provide the foundation for future studies by indicating where a genomic record of the evolution of oxygenic photosynthesis may be preserved. Results will also be shared with middle school children through the development of scientific lesson plans in collaboration with teachers. This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria. | POLYGON((161.595 -77.527,161.5953 -77.527,161.5956 -77.527,161.5959 -77.527,161.5962 -77.527,161.5965 -77.527,161.5968 -77.527,161.5971 -77.527,161.5974 -77.527,161.5977 -77.527,161.598 -77.527,161.598 -77.5271,161.598 -77.5272,161.598 -77.5273,161.598 -77.5274,161.598 -77.5275,161.598 -77.5276,161.598 -77.5277,161.598 -77.5278,161.598 -77.5279,161.598 -77.528,161.5977 -77.528,161.5974 -77.528,161.5971 -77.528,161.5968 -77.528,161.5965 -77.528,161.5962 -77.528,161.5959 -77.528,161.5956 -77.528,161.5953 -77.528,161.595 -77.528,161.595 -77.5279,161.595 -77.5278,161.595 -77.5277,161.595 -77.5276,161.595 -77.5275,161.595 -77.5274,161.595 -77.5273,161.595 -77.5272,161.595 -77.5271,161.595 -77.527)) | POINT(161.5965 -77.5275) | false | false | |||||
COLLABORATIVE RESEARCH: Remote Characterization of Microbial Mats in Taylor Valley, Antarctica, through In Situ Sampling and Spectral Validation
|
1745053 1744849 1744785 |
2019-07-03 | Salvatore, Mark; Barrett, John; Sokol, Eric |
|
Microbial mats are found throughout the McMurdo Dry Valleys where summer snowmelt provides liquid water that allows these mats to flourish. Researchers have long studied the environmental conditions microbial mats need to grow. Despite these efforts, it has been difficult to develop a broad picture of these unique ecosystems. Recent advances in satellite technology now provide researchers an exciting new tool to study these special Antarctic ecosystems from space using the unique spectral signatures associated with microbial mats. This new technology not only offers the promise that microbial mats can be mapped and studied from space, this research will also help protect these delicate environments from potentially harmful human impacts that can occur when studying them from the ground. This project will use satellite imagery and spectroscopic techniques to identify and map microbial mat communities and relate their properties and distributions to both field and lab-based measurements. This research provides an exciting new tool to help document and understand the distribution of a major component of the Antarctic ecosystem in the McMurdo Dry Valleys. The goal of this project is to establish quantitative relationships between spectral signatures derived from orbit and the physiological status and biogeochemical properties of microbial mat communities in Taylor Valley, Antarctica, as measured by field and laboratory analyses on collected samples. The goal wioll be met by (1) refining atmospheric correction techniques using in situ radiometric rectification to derive accurate surface spectra; (2) collecting multispectral orbital images concurrent with in situ sampling and spectral measurements in the field to ensure temporal comparability; (3) measuring sediment, water, and microbial mat samples for organic and inorganic carbon content, essential biogeochemical nutrients, and chlorophyll-a to determine relevant mat characteristics; and (4) quantitatively associating these laboratory-derived characteristics with field-derived and orbital spectral signatures and parameters. The result of this work will be a more robust quantitative link between the distribution of microbial mat communities and their biogeochemical properties to landscape-scale spectral signatures. This award reflects NSF's statutory mission and has been deemed worthy of support through evaluation using the Foundation's intellectual merit and broader impacts review criteria. | POLYGON((162.92 -77.56,162.971 -77.56,163.022 -77.56,163.073 -77.56,163.124 -77.56,163.175 -77.56,163.226 -77.56,163.277 -77.56,163.328 -77.56,163.379 -77.56,163.43 -77.56,163.43 -77.571,163.43 -77.582,163.43 -77.593,163.43 -77.604,163.43 -77.615,163.43 -77.626,163.43 -77.637,163.43 -77.648,163.43 -77.659,163.43 -77.67,163.379 -77.67,163.328 -77.67,163.277 -77.67,163.226 -77.67,163.175 -77.67,163.124 -77.67,163.073 -77.67,163.022 -77.67,162.971 -77.67,162.92 -77.67,162.92 -77.659,162.92 -77.648,162.92 -77.637,162.92 -77.626,162.92 -77.615,162.92 -77.604,162.92 -77.593,162.92 -77.582,162.92 -77.571,162.92 -77.56)) | POINT(163.175 -77.615) | false | false | |||||
Collaborative Research: Biogeochemistry of Cyanobactrial Mats and Hyporheic Zone Microbes in McMurdo Dry Valley Glacial Meltwater Streams
|
0739648 |
2013-12-10 | Cary, Stephen |
|
The glacial streams of the McMurdo Dry Valleys have extensive cyanobacterial mats that are a probable source of fixed C and N to the Valleys. The research will examine the interplay between the microbial mats in the ephemeral glacial streams and the microbiota of the hyporheic soils (wetted soil zone) underlying and adjacent to those mats. It is hypothesized that the mats are important sources of organic carbon and fixed nitrogen for the soil communities of the hyporheic zone, and release dissolved organic carbon (DOC) and nitrogen (DON) that serves the entire Dry Valley ecosystem. Field efforts will entail both observational and experimental components. Direct comparisons will be made between the mats and microbial populations underlying naturally rehydrated and desiccated mat areas, and between mat areas in the melt streams of the Adams and Miers Glaciers in Miers Valley. Both physiological and phylogenetic indices of the soil microbiota will be examined. Observations will include estimates of rates of mat carbon and nitrogen fixation, soil respiration and leucine and thymidine uptake (as measures of protein & DNA synthesis, respectively) by soil bacteria, bacterial densities and their molecular ecology. Experimental manipulations will include experimental re-wetting of soils and observations of the time course of response of the microbial community. The research will integrate modern molecular genetic approaches (ARISA-DNA fingerprinting and ultra deep 16S rDNA microbial phylogenetic analysis) with geochemistry to study the diversity, ecology, and function of microbial communities that thrive in these extreme environments. The broader impacts of the project include research and educational opportunities for graduate students and a postdoctoral associate. The P.I.s will involve undergraduates as work-study students and in REU programs, and will participate in educational and outreach programs. | POINT(163 -77.5) | POINT(163 -77.5) | false | false |